RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 IGHV2-70DA0A0C4DH43 119 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 ZFP92A6NM28 416 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
C9orf43-201ENST00000288462 VENTXO95231 258 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 PRB1P04280 392 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
C9orf43-201ENST00000288462 CD69Q07108 199 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 MIC13Q5XKP0 118 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 TMEM144Q7Z5S9 345 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 CYB561D1Q8N8Q1 229 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 ZNF114Q8NC26 417 aa8.17□□□□□ -1.1
C9orf43-201ENST00000288462 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 NUPL2O15504 423 aaKnown RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 NDUFS6O75380 124 aaKnown RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 GPX4P36969 197 aaPredicted RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 COMPP49747 757 aaPredicted RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 PRR20EP86478 221 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 PRR20CP86479 221 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 PRR20DP86480 221 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 PRR20BP86481 221 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 PRR20AP86496 221 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 RAB31Q13636 194 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 SLC16A13Q7RTY0 426 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 RNASEH2CQ8TDP1 164 aaKnown RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 CACNG8Q8WXS5 425 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 P2RX4Q99571 388 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
C9orf43-201ENST00000288462 VAX2Q9UIW0 290 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 NAV3Q8IVL0 2385 aa8.16□□□□□ -1.1
C9orf43-201ENST00000288462 OOSP1A8MZH6 123 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 FBP1P09467 338 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 DEFA4P12838 97 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 TAGLN2P37802 199 aaKnown RBP8.15□□□□□ -1.1
C9orf43-201ENST00000288462 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
C9orf43-201ENST00000288462 PDLIM4P50479 330 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 LCN2P80188 198 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
C9orf43-201ENST00000288462 GAMTQ14353 236 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 AWAT1Q58HT5 328 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 LHFPL4Q7Z7J7 247 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 PPP1R27Q86WC6 154 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.1
C9orf43-201ENST00000288462 ZNF843Q8N446 348 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 STPG3Q8N7X2 389 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 CCL19Q99731 98 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 FLNCQ14315 2725 aa8.15□□□□□ -1.1
C9orf43-201ENST00000288462 USP9XQ93008 2570 aaPredicted RBP8.15□□□□□ -1.1
C9orf43-201ENST00000288462 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 HMGB3O15347 200 aaKnown RBP8.15□□□□□ -1.11
C9orf43-201ENST00000288462 SUB1P53999 127 aaKnown RBP eCLIP8.15□□□□□ -1.11
C9orf43-201ENST00000288462 B2MP61769 119 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 TNXAQ16473 311 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 MINOS1Q5TGZ0 78 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 FAM90A2PQ658T7 463 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 TMEM88Q6PEY1 159 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 RBMS3Q6XE24 437 aaKnown RBP8.15□□□□□ -1.11
C9orf43-201ENST00000288462 SSMEM1Q8WWF3 244 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.11
C9orf43-201ENST00000288462 MINOS1-NBL1R4GNA1 71 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 CACNA1BQ00975 2339 aa8.15□□□□□ -1.11
C9orf43-201ENST00000288462 TEX22C9J3V5 150 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 LINC00869P0C866 280 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 RHEBQ15382 184 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 TMPRSS5Q9H3S3 457 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 FBXL15Q9H469 300 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 HILPDAQ9Y5L2 63 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 TACC2O95359 2948 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 TSPAN4O14817 238 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 ACTL6BO94805 426 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 NDUFA3O95167 84 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 PSMB3P49720 205 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 MEF2BQ02080 365 aaPredicted RBP8.14□□□□□ -1.11
C9orf43-201ENST00000288462 CCDC144NLQ6NUI1 221 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 NPBQ8NG41 125 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 TBX15Q96SF7 602 aa8.14□□□□□ -1.11
C9orf43-201ENST00000288462 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
C9orf43-201ENST00000288462 A0A1W2PPV4 95 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 C7orf77A4D0Y5 90 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 H3BQ15 152 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 NBR2O15453 112 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 FOXH1O75593 365 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 MOSP00540 346 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 PAX6P26367 422 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 CD81P60033 236 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 MLANAQ16655 118 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 SLC35E3Q7Z769 313 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 DYNAPQ8N1N2 210 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 C10orf105Q8TEF2 133 aa8.13□□□□□ -1.11
C9orf43-201ENST00000288462 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms