RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 A0A0G2JNJ9 132 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 ZNF324O75467 553 aaPredicted RBP15.49■□□□□ 0.07
PCDH1-201ENST00000287008 CEACAM4O75871 244 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 SH3BGRL3Q9H299 93 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 Q9UFV3 132 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 TRAV24A0A0B4J272 114 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 VDAC2P45880 294 aaPredicted RBP15.49■□□□□ 0.07
PCDH1-201ENST00000287008 TBX15Q96SF7 602 aa15.49■□□□□ 0.07
PCDH1-201ENST00000287008 K7ENP7 123 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 KIAA2026Q5HYC2 2103 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 ZNF385CQ66K41 422 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-201ENST00000287008 TCF24Q7RTU0 167 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 HIST1H2BAQ96A08 127 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 PIEZO1Q92508 2521 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 F12P00748 615 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-201ENST00000287008 IGHG3P01860 377 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 DANCRP0C864 163 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 IGFBP2P18065 325 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 CD69Q07108 199 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 ZNF497Q6ZNH5 498 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 TNFRSF14Q92956 283 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 GPR82Q96P67 336 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 BET1LQ9NYM9 111 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 ZNF56Q15929 161 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 UPK2O00526 184 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 MDKP21741 143 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-201ENST00000287008 RNF151Q2KHN1 245 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 NPCDR1Q9BY65 106 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 PRO1933Q9H354 126 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 THSD7BQ9C0I4 1608 aa15.48■□□□□ 0.07
PCDH1-201ENST00000287008 LHFPL5Q8TAF8 219 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 TIMM23O14925 209 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 MBNL2Q5VZF2 373 aaKnown RBP15.47■□□□□ 0.07
PCDH1-201ENST00000287008 MAP1LC3AQ9H492 121 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 B4DSR2 109 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 C9JCJ5 164 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 CD8AP01732 235 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 GPX4P36969 197 aaPredicted RBP15.47■□□□□ 0.07
PCDH1-201ENST00000287008 WDR25Q64LD2 544 aaPredicted RBP15.47■□□□□ 0.07
PCDH1-201ENST00000287008 DMRTA2Q96SC8 542 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 PRR32B1ATL7 298 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 NABP1Q96AH0 204 aa15.47■□□□□ 0.07
PCDH1-201ENST00000287008 RCC1LQ96I51 464 aaKnown RBP15.47■□□□□ 0.07
PCDH1-201ENST00000287008 C5orf52A6NGY3 159 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 RBFOX2O43251 390 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCDH1-201ENST00000287008 VPS25Q9BRG1 176 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 TMEM250H0YL14 139 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 TFF1P04155 84 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 SAMD13Q5VXD3 122 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 WNT2P09544 360 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 TEX45Q8NA69 505 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 PARLQ9H300 379 aa15.46■□□□□ 0.07
PCDH1-201ENST00000287008 RPUSD1Q9UJJ7 312 aaKnown RBP15.46■□□□□ 0.07
PCDH1-201ENST00000287008 TCF20Q9UGU0 1960 aaKnown RBP15.46■□□□□ 0.06
PCDH1-201ENST00000287008 FAM89BQ8N5H3 189 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 KIR2DL4Q99706 377 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 SONP18583 2426 aaKnown RBP15.45■□□□□ 0.06
PCDH1-201ENST00000287008 HERPUD1Q15011 391 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 OR52E5Q8NH55 327 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 ZFP30Q9Y2G7 519 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 NYNRINQ9P2P1 1898 aaKnown RBP15.45■□□□□ 0.06
PCDH1-201ENST00000287008 IGKV1D-13A0A0B4J2D9 117 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 IGKV1-13P0DP09 117 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 AGAP20933 346 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 RTBDNQ9BSG5 229 aaPredicted RBP15.45■□□□□ 0.06
PCDH1-201ENST00000287008 FHITP49789 147 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 PLAURQ03405 335 aa15.45■□□□□ 0.06
PCDH1-201ENST00000287008 IFITM10A6NMD0 228 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 Q5BKY6 102 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 TMEM144Q7Z5S9 345 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 PAQR4Q8N4S7 273 aaPredicted RBP15.44■□□□□ 0.06
PCDH1-201ENST00000287008 OR11H4Q8NGC9 324 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 NUDT3O95989 172 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 NEU1Q99519 415 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 MYO18BQ8IUG5 2567 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 RHOGP84095 191 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 FAM209BQ5JX69 171 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 MOB4Q9Y3A3 225 aa15.44■□□□□ 0.06
PCDH1-201ENST00000287008 GCSHP23434 173 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 GAS1P54826 345 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 HEPN1Q6WQI6 88 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 ARFGEF3Q5TH69 2177 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 SELLP14151 372 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 EGR1P18146 543 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 CENPWQ5EE01 88 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 OR4C5Q8NGB2 326 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 OR9G9P0C7N8 305 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 PAPPA-AS1Q5QFB9 102 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 C11orf44Q8N8P7 122 aa15.43■□□□□ 0.06
PCDH1-201ENST00000287008 TMEM178BH3BS89 294 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 GLRX5Q86SX6 157 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 KLHDC3Q9BQ90 382 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 ZNF646O15015 1829 aaPredicted RBP15.42■□□□□ 0.06
PCDH1-201ENST00000287008 HLA-DRB1P01911 266 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 ZGRF1Q86YA3 2104 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 VN1R17PQ8TDU5 208 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 RARRES2Q99969 163 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 A0A087WV48 116 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 H7C1H1 209 aa15.42■□□□□ 0.06
PCDH1-201ENST00000287008 CLPSP04118 112 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms