RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 SPTBN2O15020 2390 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 ZNF638Q14966 1978 aaKnown RBP7.69□□□□□ -1.18
SMC2-201ENST00000286398 NCR2O95944 276 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 FOXL2P58012 376 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 ZNF114Q8NC26 417 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 TTTY12Q9BZ98 90 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 LSM4Q9Y4Z0 139 aaKnown RBP7.69□□□□□ -1.18
SMC2-201ENST00000286398 NUP98P52948 1817 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 IGHV3-64A0A075B6Q5 118 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 C21orf140B9A014 251 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 IGKCP01834 107 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 ERVK11-1P61568 191 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 TMEM30BQ3MIR4 351 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 BCL6BQ8N143 479 aaPredicted RBP7.69□□□□□ -1.18
SMC2-201ENST00000286398 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 CREBBPQ92793 2442 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 A0A1B0GTI1 187 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 VWC2LB2RUY7 222 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 NDUFA2O43678 99 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 CXCL1P09341 107 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 C1QL2Q7Z5L3 287 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 LAMA4Q16363 1823 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 A0A087X0K7 114 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 A0A1W2PRE2 83 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 SPINT1O43278 529 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 TDGF1P13385 188 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 GATA2P23769 480 aaPredicted RBP7.69□□□□□ -1.18
SMC2-201ENST00000286398 RPL39P5Q59GN2 51 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 TDHQ8IZJ6 230 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 DEFB124Q8NES8 71 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 TMEM171Q8WVE6 324 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 ZNF625Q96I27 306 aaPredicted RBP7.69□□□□□ -1.18
SMC2-201ENST00000286398 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 SCN9AQ15858 1988 aa7.69□□□□□ -1.18
SMC2-201ENST00000286398 PRR32B1ATL7 298 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 F8VVB4 439 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 F8VWA3 439 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 TRACP01848 142 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 PRSS53Q2L4Q9 553 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 C19orf48Q6RUI8 117 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 OCC1Q8TAD7 63 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 SEMA5BQ9P283 1151 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 GATD1Q8NB37 220 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 ZNF784Q8NCA9 323 aaPredicted RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 PLPPR1Q8TBJ4 325 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 EEF1AKMT3Q96AZ1 226 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 SPANXA1Q9NS26 97 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 CRIM1Q9NZV1 1036 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 NEUROG3Q9Y4Z2 214 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 PROB1E7EW31 1015 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 FAM89BQ8N5H3 189 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 APOBEC4Q8WW27 367 aaKnown RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 DLX4Q92988 240 aaPredicted RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 DUX5Q96PT3 197 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 Q9H3A6 140 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 CST9LQ9H4G1 147 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 SCN2AQ99250 2005 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 IGKV1D-42A0A075B6H8 117 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 IGKV1-8A0A0C4DH67 115 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 C17orf98A8MV24 154 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 CD33P20138 364 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 LY6G6FQ5SQ64 297 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 TEX38Q6PEX7 206 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 H0YIZ8 118 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 BTCP35070 178 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 TDGF1P3P51864 188 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 STARD6P59095 220 aa7.68□□□□□ -1.18
SMC2-201ENST00000286398 KLF14Q8TD94 323 aaPredicted RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 CHCHD1Q96BP2 118 aaKnown RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 MBNL3Q9NUK0 354 aaKnown RBP7.68□□□□□ -1.18
SMC2-201ENST00000286398 TOMM40O96008 361 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 IFI27P40305 119 aaPredicted RBP7.67□□□□□ -1.18
SMC2-201ENST00000286398 OSR1Q8TAX0 266 aaPredicted RBP7.67□□□□□ -1.18
SMC2-201ENST00000286398 CACNA1SQ13698 1873 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 IGHV5-10-1A0A0J9YXX1 117 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 C12orf77C9JDV5 145 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 PPBPP02775 128 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 UMODP07911 640 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 COX5BP10606 129 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 TSPAN7P41732 249 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 SPEM2Q0P670 501 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 GTSCR1Q86UQ5 136 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 CACNG8Q8WXS5 425 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 GTF3AQ92664 365 aaKnown RBP7.67□□□□□ -1.18
SMC2-201ENST00000286398 TM2D1Q9BX74 207 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 TSSC4Q9Y5U2 329 aaPredicted RBP7.67□□□□□ -1.18
SMC2-201ENST00000286398 C9orf172C9J069 976 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 GLRXP35754 106 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 CLEC7AQ9BXN2 247 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 TMEM242Q9NWH2 141 aa7.67□□□□□ -1.18
SMC2-201ENST00000286398 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms