RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 TRAV24A0A0B4J272 114 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 ODAMA1E959 279 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 SIRPB1O00241 398 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 G6PCP35575 357 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 LRRC10Q5BKY1 277 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 LDLRAD2Q5SZI1 272 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 Q8N7P7 452 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
ERCC3-201ENST00000285398 V9GYV3 84 aa8.72□□□□□ -1.01
ERCC3-201ENST00000285398 NDUFS8O00217 210 aa8.71□□□□□ -1.01
ERCC3-201ENST00000285398 HLA-DQA1P01909 254 aa8.71□□□□□ -1.01
ERCC3-201ENST00000285398 FAM58AQ8N1B3 248 aa8.71□□□□□ -1.01
ERCC3-201ENST00000285398 OR4P4Q8NGL7 312 aa8.71□□□□□ -1.01
ERCC3-201ENST00000285398 EAF1Q96JC9 268 aaPredicted RBP8.71□□□□□ -1.01
ERCC3-201ENST00000285398 TRGV10A0A0A0MS01 117 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 SYNGR1O43759 233 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 RBMXL2O75526 392 aaKnown RBP8.71□□□□□ -1.02
ERCC3-201ENST00000285398 MT-CO2P00403 227 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 P0C879 139 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 SRIP30626 198 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 OPRK1P41145 380 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 RPS16P62249 146 aaKnown RBP8.71□□□□□ -1.02
ERCC3-201ENST00000285398 VWA1Q6PCB0 445 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 ATOH7Q8N100 152 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 OR4F17Q8NGA8 305 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 TSKUQ8WUA8 353 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 SARAFQ96BY9 339 aa8.71□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF462Q96JM2 2506 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 HIVEP3Q5T1R4 2406 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 ICE1Q9Y2F5 2266 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 AHRRA9YTQ3 701 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 TOX4O94842 621 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 NTF3P20783 257 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 PDLIM3Q53GG5 364 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-201ENST00000285398 SEM1Q6ZVN7 128 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 MRPL21Q7Z2W9 205 aaKnown RBP8.7□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF439Q8NDP4 499 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 TRAPPC2LQ9UL33 140 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 LRBAP50851 2863 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 K7ERU9 68 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 RAMP3O60896 148 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 OR10J4P0C629 311 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 SELENOVP59797 346 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 C11orf52Q96A22 123 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 CLEC7AQ9BXN2 247 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
ERCC3-201ENST00000285398 AMY1AP04745 511 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF816Q0VGE8 651 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-201ENST00000285398 CATR1Q13166 79 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF718Q3SXZ3 478 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF645Q8N7E2 425 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 NINJ1Q92982 152 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 OR2D2Q9H210 308 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
ERCC3-201ENST00000285398 YTHDF2Q9Y5A9 579 aaKnown RBP8.69□□□□□ -1.02
ERCC3-201ENST00000285398 FAM215AQ9Y5M1 114 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 IGKV3D-15A0A087WSY6 115 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF503-AS2A6NEH8 195 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 BMPR1BO00238 502 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 RAB29O14966 203 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 LINC00869P0C866 280 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 H2BFWTQ7Z2G1 175 aa8.69□□□□□ -1.02
ERCC3-201ENST00000285398 UTP20O75691 2785 aaKnown RBP8.69□□□□□ -1.02
ERCC3-201ENST00000285398 H0YJW9 148 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 SPINK4O60575 86 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 CLDN14O95500 239 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 CCL2P13500 99 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 CCNOP22674 350 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 GNG4P50150 75 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 ARF1P84077 181 aaKnown RBP8.68□□□□□ -1.02
ERCC3-201ENST00000285398 LCN12Q6JVE5 192 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 SMIM12Q96EX1 92 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF488Q96MN9 340 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 CDIPTO14735 213 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 HSBP1O75506 76 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 LYZL6O75951 148 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 APCSP02743 223 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 IGLL1P15814 213 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 GCHFRP30047 84 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 Q5PR19 223 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 OR4A47Q6IF82 309 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 GFRALQ6UXV0 394 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 ZNF596Q8TC21 504 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 NUDT11Q96G61 164 aa8.68□□□□□ -1.02
ERCC3-201ENST00000285398 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
ERCC3-201ENST00000285398 NRN1LQ496H8 165 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms