RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FAM90A2PQ658T7 463 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 STPG3Q8N7X2 389 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 ABHD5Q8WTS1 349 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 POLQO75417 2590 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 COLCA2A8K830 154 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 IL6RP08887 468 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-201ENST00000279247 MEF2BQ02080 365 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-201ENST00000279247 TNXAQ16473 311 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 C11orf71Q6IPW1 123 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 ZNF343Q6P1L6 599 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 OR2T6Q8NHC8 308 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 MIOXQ9UGB7 285 aa14.49□□□□□ -0.09
CAPN1-201ENST00000279247 MDKP21741 143 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-201ENST00000279247 CD81P60033 236 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 RBMS3Q6XE24 437 aaKnown RBP14.48□□□□□ -0.09
CAPN1-201ENST00000279247 OR5B3Q8NH48 314 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 SAV1Q9H4B6 383 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-201ENST00000279247 AURKAIP1Q9NWT8 199 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-201ENST00000279247 BUB1B-PAK6H3BSN5 160 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 LIPFP07098 398 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 RAB13P51153 203 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 WT1-ASQ06250 92 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 VMA21Q3ZAQ7 101 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 OR51G1Q8NGK1 321 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 SMDT1Q9H4I9 107 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 SEPSECSQ9HD40 501 aaKnown RBP14.48□□□□□ -0.09
CAPN1-201ENST00000279247 FKBP11Q9NYL4 201 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 ZNF257Q9Y2Q1 563 aa14.48□□□□□ -0.09
CAPN1-201ENST00000279247 OR2C1O95371 312 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 IGLV2-23P01705 113 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 ARL14EPLP0DKL9 152 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 USF1P22415 310 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-201ENST00000279247 ERHP84090 104 aaKnown RBP14.47□□□□□ -0.09
CAPN1-201ENST00000279247 C4orf17Q53FE4 359 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 SMUG1Q53HV7 270 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 SLC35E3Q7Z769 313 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 LINC00311Q8N616 119 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 TVP23CQ96ET8 276 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 IGKV1OR2-108A0A075B7D4 117 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 IGHV1-3A0A0C4DH29 117 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 RNASE2P10153 161 aaKnown RBP14.47□□□□□ -0.09
CAPN1-201ENST00000279247 PLGLAQ15195 96 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 LDLRAD2Q5SZI1 272 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 SMIM7Q9BQ49 75 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 SSBP3Q9BWW4 388 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-201ENST00000279247 IGLV1-47P01700 117 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 OR10J1P30954 320 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 OPRK1P41145 380 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 GPR6P46095 362 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-201ENST00000279247 LHFPL4Q7Z7J7 247 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 LPAR2Q9HBW0 351 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 NDUFA4L2Q9NRX3 87 aa14.47□□□□□ -0.09
CAPN1-201ENST00000279247 SNRPCP09234 159 aaKnown RBP14.46□□□□□ -0.09
CAPN1-201ENST00000279247 ATP5G3P48201 142 aa14.46□□□□□ -0.09
CAPN1-201ENST00000279247 ADIRFQ15847 76 aa14.46□□□□□ -0.09
CAPN1-201ENST00000279247 OR4P4Q8NGL7 312 aa14.46□□□□□ -0.09
CAPN1-201ENST00000279247 HIST1H2BAQ96A08 127 aa14.46□□□□□ -0.09
CAPN1-201ENST00000279247 FBXL15Q9H469 300 aa14.46□□□□□ -0.09
CAPN1-201ENST00000279247 LOC105371242A0A075B767 164 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 A0A087X0M5 115 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 A0A1B0GX30 115 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 LY86O95711 162 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 LCN2P80188 198 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 GAMTQ14353 236 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 RHEBQ15382 184 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 VSTM2AQ8TAG5 236 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 DOK5Q9P104 306 aa14.46□□□□□ -0.1
CAPN1-201ENST00000279247 CGB1A6NKQ9 187 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 FOXH1O75593 365 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 SSBP2P81877 361 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-201ENST00000279247 RAB31Q13636 194 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 TMEM167AQ8TBQ9 72 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 MPDU1O75352 247 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 MC5RP33032 325 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 FAM78BQ5VT40 261 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 GGACTQ9BVM4 153 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 CHODLQ9H9P2 273 aa14.45□□□□□ -0.1
CAPN1-201ENST00000279247 METTL1Q9UBP6 276 aaKnown RBP14.45□□□□□ -0.1
CAPN1-201ENST00000279247 LSM4Q9Y4Z0 139 aaKnown RBP14.45□□□□□ -0.1
CAPN1-201ENST00000279247 A0A1W2PPI3 338 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 C11orf94C9JXX5 98 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 HES1Q14469 280 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 MISP3Q96FF7 219 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 TIMM23O14925 209 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 AREGP15514 252 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 NEU4Q8WWR8 484 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-201ENST00000279247 SSX2Q16385 188 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 CLEC12BQ2HXU8 276 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 ZNF596Q8TC21 504 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 PCGF1Q9BSM1 259 aa14.44□□□□□ -0.1
CAPN1-201ENST00000279247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.12e-8■■■□□ 16
CAPN1-201ENST00000279247 FCN1O00602 326 aa14.43□□□□□ -0.1
CAPN1-201ENST00000279247 MIR17HGQ75NE6 70 aa14.43□□□□□ -0.1
CAPN1-201ENST00000279247 P2RX4Q99571 388 aa14.43□□□□□ -0.1
CAPN1-201ENST00000279247 DERL1Q9BUN8 251 aa14.43□□□□□ -0.1
CAPN1-201ENST00000279247 FNDC4Q9H6D8 234 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-201ENST00000279247 HNF1AP20823 631 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 ZFP36P26651 326 aaKnown RBP14.42□□□□□ -0.1
CAPN1-201ENST00000279247 ZNF137PP52743 207 aa14.42□□□□□ -0.1
CAPN1-201ENST00000279247 SPNS3Q6ZMD2 512 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms