RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MMD2Q8IY49 270 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 SSMEM1Q8WWF3 244 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 CACNG8Q8WXS5 425 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 C20orf24Q9BUV8 137 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 KCNIP2Q9NS61 270 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 SLC45A2Q9UMX9 530 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 SIGLEC9Q9Y336 463 aa7.71□□□□□ -1.18
TRIM55-201ENST00000276573 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 HRNRQ86YZ3 2850 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 A0A1W2PPI3 338 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 IGHV2-5P01817 119 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 LINC00869P0C866 280 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 DEFA4P12838 97 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 MAS1LP35410 378 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 AKR1C3P42330 323 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PSMB3P49720 205 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PRR20EP86478 221 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PRR20CP86479 221 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PRR20DP86480 221 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PRR20BP86481 221 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PRR20AP86496 221 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 RHEBQ15382 184 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 FAM90A2PQ658T7 463 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 KIR3DL3Q8N743 410 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 TNCP24821 2201 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 RELNP78509 3460 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 ODF3BA8MYP8 253 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 GOSR1O95249 250 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 ATF4P18848 351 aaPredicted RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 CEACAM3P40198 252 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 CD81P60033 236 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 B2MP61769 119 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 PAX2Q02962 417 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 KLRD1Q13241 179 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 RNASEH2CQ8TDP1 164 aaKnown RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 TVP23CQ96ET8 276 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 MANBALQ9NQG1 85 aa7.7□□□□□ -1.18
TRIM55-201ENST00000276573 METTL1Q9UBP6 276 aaKnown RBP7.7□□□□□ -1.18
TRIM55-201ENST00000276573 IGKV1OR2-108A0A075B7D4 117 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 COLCA2A8K830 154 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 TIMM23O14925 209 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 STAG3L2P0CL84 134 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 STAG3L3P0CL85 134 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 RPL27AP46776 148 aaKnown RBP7.69□□□□□ -1.18
TRIM55-201ENST00000276573 LMO4P61968 165 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-201ENST00000276573 TNXAQ16473 311 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 PPP1R27Q86WC6 154 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 ABHD5Q8WTS1 349 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 IGFBPL1Q8WX77 278 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 NIPSNAP3BQ9BS92 247 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 HILPDAQ9Y5L2 63 aa7.69□□□□□ -1.18
TRIM55-201ENST00000276573 SPTBN1Q01082 2364 aaKnown RBP7.68□□□□□ -1.18
TRIM55-201ENST00000276573 IGLC7A0M8Q6 106 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 PAGE4O60829 102 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 ACTL6BO94805 426 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 VENTXO95231 258 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 OR10J1P30954 320 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 COMPP49747 757 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-201ENST00000276573 HABP2Q14520 560 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-201ENST00000276573 PVRIGQ6DKI7 326 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 SLC16A13Q7RTY0 426 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 VMO1Q7Z5L0 202 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 LHFPL4Q7Z7J7 247 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 IQCF2Q8IXL9 164 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 MRPL41Q8IXM3 137 aaKnown RBP7.68□□□□□ -1.18
TRIM55-201ENST00000276573 OR2T6Q8NHC8 308 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 CFHR4Q92496 578 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 FBXL15Q9H469 300 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 ARHGAP32A7KAX9 2087 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 DCHS2Q6V1P9 2916 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 TMEM250H0YL14 139 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 FCN1O00602 326 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 IGHV4-39P01824 125 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 RHOBP62745 196 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 LCN2P80188 198 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 C15orf54Q8N8G6 183 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 SLC35E1Q96K37 410 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 SIRPDQ9H106 197 aa7.68□□□□□ -1.18
TRIM55-201ENST00000276573 FNDC4Q9H6D8 234 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-201ENST00000276573 A0A1W2PRD5 423 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 A0A1W2PRF3 423 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 A0A1W2PRM7 423 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 CXorf1O96002 111 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 REG1AP05451 166 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 PAX6P26367 422 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 PDLIM4P50479 330 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 C17orf50Q8WW18 174 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 BPESC1Q9GZL8 116 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 SDF2L1Q9HCN8 221 aa7.67□□□□□ -1.18
TRIM55-201ENST00000276573 SEPSECSQ9HD40 501 aaKnown RBP7.67□□□□□ -1.18
TRIM55-201ENST00000276573 A0A087WWC5 75 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 IGHV2-70DA0A0C4DH43 119 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 ZNF727A8MUV8 499 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms