RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 FAM90A5PA8MXJ8 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A23PA8MXZ1 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 EFNA2O43921 213 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 WISP1O95388 367 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A15PP0C7V4 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A13PP0C7W8 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A14PP0C7W9 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A24PP0C7X0 464 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 C10orf128Q5T292 105 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 VSTM2AQ8TAG5 236 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 PRNDQ9UKY0 176 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 UFC1Q9Y3C8 167 aa10.2□□□□□ -0.78
ERBB2-201ENST00000269571 AMMECR1Q9Y4X0 333 aaPredicted RBP10.2□□□□□ -0.78
ERBB2-201ENST00000269571 USF3Q68DE3 2245 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 IGHV2OR16-5A0A0B4J2B6 119 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 NABP2Q9BQ15 211 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 COL4A6Q14031 1691 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 KIR2DL5BA0A0G2JN68 375 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 KIR2DL5BA0A0G2JPC4 375 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 FAM214BQ7L5A3 538 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 KIR2DL5AQ8N109 375 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 RPP25LQ8N5L8 163 aaKnown RBP10.19□□□□□ -0.78
ERBB2-201ENST00000269571 CHODLQ9H9P2 273 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 IGKV3-7A0A075B6H7 116 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 SYNGR3O43761 229 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 SP9P0CG40 484 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 KIR2DS2P43631 304 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 PCOLCEQ15113 449 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 LINC00596Q86U02 117 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 TMEM45BQ96B21 275 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
ERBB2-201ENST00000269571 J3KRW8 73 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 K7ESF4 209 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 ORM1P02763 201 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 TFF1P04155 84 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 CD40P25942 277 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 HIST1H1AQ02539 215 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-201ENST00000269571 TM4SF20Q53R12 229 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 FER1L6-AS1Q8NA97 138 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 CCL13Q99616 98 aa10.19□□□□□ -0.78
ERBB2-201ENST00000269571 FNDC1Q4ZHG4 1894 aaPredicted RBP10.18□□□□□ -0.78
ERBB2-201ENST00000269571 TRAV9-1A0A075B6T8 112 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 IGLC2P0DOY2 106 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 LYL1P12980 280 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 CDKN1AP38936 164 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 SEC11AP67812 179 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 QRFPP83859 136 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 RIGQ13278 110 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 RPL39P5Q59GN2 51 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 Q6ZVH6 145 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 ZNF703Q9H7S9 590 aaPredicted RBP10.18□□□□□ -0.78
ERBB2-201ENST00000269571 PLXND1Q9Y4D7 1925 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 COX6A1P12074 109 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 TMEM116Q8NCL8 245 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 INSIG2Q9Y5U4 225 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 CEACAM18A8MTB9 384 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 C12orf77C9JDV5 145 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 PFN1P07737 140 aaKnown RBP10.18□□□□□ -0.78
ERBB2-201ENST00000269571 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 CA7P43166 264 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 FAM90A2PQ658T7 463 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 OR1L8Q8NGR8 309 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 SSBP4Q9BWG4 385 aaPredicted RBP10.18□□□□□ -0.78
ERBB2-201ENST00000269571 MS4A5Q9H3V2 200 aa10.18□□□□□ -0.78
ERBB2-201ENST00000269571 MUC21A0A0G2JKD1 596 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 MUC21A0A140T8X8 626 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 SLC25A17O43808 307 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 RAMP3O60896 148 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 IGLV3-19P01714 112 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 LIPFP07098 398 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 CD3EP07766 207 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
ERBB2-201ENST00000269571 MPV17P39210 176 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 MUC21Q5SSG8 566 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 FAM169BQ8N8A8 192 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 NOTCH4Q99466 2003 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 IGKV1-27A0A075B6S5 117 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 TMEM54Q969K7 222 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 FTH1P19P0C7X4 201 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 RAB9AP51151 201 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 SPSB3Q6PJ21 355 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 ZNF524Q96C55 264 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 REG1AP05451 166 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 C8orf88P0DMB2 117 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 IGFBP2P18065 325 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 FGFBP3Q8TAT2 258 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 PRDM14Q9GZV8 571 aa10.17□□□□□ -0.78
ERBB2-201ENST00000269571 DENND4AQ7Z401 1863 aa10.16□□□□□ -0.78
ERBB2-201ENST00000269571 MC5RP33032 325 aa10.16□□□□□ -0.78
ERBB2-201ENST00000269571 HSPE1P61604 102 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms