RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C9orf106Q8NAJ2 232 aa22.53■■□□□ 1.2
CBX4-201ENST00000269397 YLPM1P49750 1951 aaKnown RBP22.53■■□□□ 1.2
CBX4-201ENST00000269397 DSCAMO60469 2012 aa22.53■■□□□ 1.2
CBX4-201ENST00000269397 SRIP30626 198 aa22.53■■□□□ 1.2
CBX4-201ENST00000269397 OR51B2Q9Y5P1 312 aa22.53■■□□□ 1.2
CBX4-201ENST00000269397 A0A1W2PS18 150 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 LNP1A1A4G5 178 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 GNG10P50151 68 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 MOGAT3Q86VF5 341 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 NEUROG1Q92886 237 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 IGHV1-18A0A0C4DH31 117 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 F2RL2O00254 374 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 ZNF83P51522 516 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 MMDQ15546 238 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 TIGITQ495A1 244 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 TMEM178AQ8NBL3 297 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 SLC45A2Q9UMX9 530 aa22.52■■□□□ 1.2
CBX4-201ENST00000269397 FOXA2Q9Y261 457 aaPredicted RBP22.52■■□□□ 1.2
CBX4-201ENST00000269397 PLEKHA3Q9HB20 300 aa22.51■■□□□ 1.19
CBX4-201ENST00000269397 ZNRD1Q9P1U0 126 aa22.51■■□□□ 1.19
CBX4-201ENST00000269397 SPATA45Q537H7 98 aa22.51■■□□□ 1.19
CBX4-201ENST00000269397 LINC00479Q96M42 142 aa22.5■■□□□ 1.19
CBX4-201ENST00000269397 OR2V2Q96R30 315 aa22.5■■□□□ 1.19
CBX4-201ENST00000269397 WNT10AQ9GZT5 417 aa22.5■■□□□ 1.19
CBX4-201ENST00000269397 TRBV9A0A0B4J1U6 114 aa22.5■■□□□ 1.19
CBX4-201ENST00000269397 C17orf58Q2M2W7 97 aa22.5■■□□□ 1.19
CBX4-201ENST00000269397 J3QR06 171 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 BMPR1BO00238 502 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 KIR2DS2P43631 304 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 OR9G1Q8NH87 305 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 SSBP3Q9BWW4 388 aaPredicted RBP22.49■■□□□ 1.19
CBX4-201ENST00000269397 VHLLQ6RSH7 139 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 ATOH7Q8N100 152 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 PPP1R35Q8TAP8 253 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 KCNS1Q96KK3 526 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 RNF2Q99496 336 aa22.49■■□□□ 1.19
CBX4-201ENST00000269397 NTF3P20783 257 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 MRPS11P82912 194 aaKnown RBP22.48■■□□□ 1.19
CBX4-201ENST00000269397 IBA57Q5T440 356 aaKnown RBP22.48■■□□□ 1.19
CBX4-201ENST00000269397 FAM168AQ92567 244 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 TMEM167BQ9NRX6 74 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 IGLV2-8P01709 118 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 IGKV1-16P04430 117 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 C1orf174Q8IYL3 243 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 OR4B1Q8NGF8 309 aa22.48■■□□□ 1.19
CBX4-201ENST00000269397 TECRQ9NZ01 308 aaKnown RBP22.48■■□□□ 1.19
CBX4-201ENST00000269397 MBNL2Q5VZF2 373 aaKnown RBP22.47■■□□□ 1.19
CBX4-201ENST00000269397 WDR73Q6P4I2 378 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 STARD4Q96DR4 205 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 CDC42EP3Q9UKI2 254 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 TRAV5A0A0B4J249 113 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 SPRY3O43610 288 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 GUSBP1Q15486 140 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 CR1LQ2VPA4 569 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 MORN5Q5VZ52 161 aa22.47■■□□□ 1.19
CBX4-201ENST00000269397 SLC25A10Q9UBX3 287 aaPredicted RBP22.47■■□□□ 1.19
CBX4-201ENST00000269397 PRR31Q5SQ13 230 aa22.46■■□□□ 1.19
CBX4-201ENST00000269397 MRPL52Q86TS9 123 aaKnown RBP22.46■■□□□ 1.19
CBX4-201ENST00000269397 OSTCQ9NRP0 149 aa22.46■■□□□ 1.19
CBX4-201ENST00000269397 RP1L1Q8IWN7 2480 aaPredicted RBP22.46■■□□□ 1.19
CBX4-201ENST00000269397 TRAV34A0A0B4J273 112 aa22.46■■□□□ 1.19
CBX4-201ENST00000269397 DMRTA1Q5VZB9 504 aa22.46■■□□□ 1.19
CBX4-201ENST00000269397 DEFB108BQ8NET1 73 aa22.46■■□□□ 1.19
CBX4-201ENST00000269397 SRRM4A7MD48 611 aaKnown RBP22.45■■□□□ 1.19
CBX4-201ENST00000269397 MT-ND6P03923 174 aa22.45■■□□□ 1.19
CBX4-201ENST00000269397 C3orf79P0CE67 100 aa22.45■■□□□ 1.19
CBX4-201ENST00000269397 CTRLP40313 264 aa22.45■■□□□ 1.19
CBX4-201ENST00000269397 OR10W1Q8NGF6 305 aa22.45■■□□□ 1.19
CBX4-201ENST00000269397 RAB7AP51149 207 aa22.45■■□□□ 1.18
CBX4-201ENST00000269397 OR10J3Q5JRS4 329 aa22.45■■□□□ 1.18
CBX4-201ENST00000269397 PRO3102Q9H379 93 aa22.45■■□□□ 1.18
CBX4-201ENST00000269397 DCHS1Q96JQ0 3298 aa22.45■■□□□ 1.18
CBX4-201ENST00000269397 ZNF324O75467 553 aaPredicted RBP22.44■■□□□ 1.18
CBX4-201ENST00000269397 MMP23AO75900 390 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 AMY1AP04745 511 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 GAGE1Q13065 139 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 MAJINQ3KP22 176 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 CORO2AQ92828 525 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 CGB3P0DN86 165 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 CGB7P0DN87 165 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 SLAQ13239 276 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 NIT1Q86X76 327 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 IGLV1-44P01699 117 aa22.44■■□□□ 1.18
CBX4-201ENST00000269397 PLCE1Q9P212 2302 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 ISLRO14498 428 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 OR5G3P0C626 314 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 CCL11P51671 97 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 COL5A1-AS1Q5SY13 56 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 LCN12Q6JVE5 192 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 RND1Q92730 232 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 RBM14Q96PK6 669 aaKnown RBP22.43■■□□□ 1.18
CBX4-201ENST00000269397 TXN2Q99757 166 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 CACNA1GO43497 2377 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 DSCAML1Q8TD84 2053 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 RPL19P84098 196 aaKnown RBP22.43■■□□□ 1.18
CBX4-201ENST00000269397 SRSF6Q13247 344 aaKnown RBP22.43■■□□□ 1.18
CBX4-201ENST00000269397 TSKUQ8WUA8 353 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 ITLN1Q8WWA0 313 aa22.43■■□□□ 1.18
CBX4-201ENST00000269397 KBTBD11-OT1A0A1B0GTJ5 212 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 APCSP02743 223 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms