RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 Q8WTZ3 238 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 WDR61Q9GZS3 305 aaKnown RBP16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 OR51M1Q9H341 326 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 ENY2Q9NPA8 101 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 NIT2Q9NQR4 276 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 AKAP6Q13023 2319 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 ZNF727A8MUV8 499 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 ODF3BA8MYP8 253 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 FBP1P09467 338 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 HOXA5P20719 270 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 USF1P22415 310 aaPredicted RBP16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 S100PP25815 95 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 ZNF674Q2M3X9 581 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 TPTE2P1Q5T6R2 138 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 TMEM167AQ8TBQ9 72 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 C10orf105Q8TEF2 133 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 VAX2Q9UIW0 290 aa16.59■□□□□ 0.25
LYSMD2-201ENST00000267838 TEX50A0A1B0GTY4 177 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 NDUFS8O00217 210 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 LGALS7P47929 136 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 RAB11AP62491 216 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 PRCDQ00LT1 54 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 VMA21Q3ZAQ7 101 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 LDLRAD2Q5SZI1 272 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 FAM90A2PQ658T7 463 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 RCC1LQ96I51 464 aaKnown RBP16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 RITA1Q96K30 269 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 HINT2Q9BX68 163 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 SIRPDQ9H106 197 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 DPM3Q9P2X0 92 aa16.58■□□□□ 0.24
LYSMD2-201ENST00000267838 COL12A1Q99715 3063 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 ZFP92A6NM28 416 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 FOXH1O75593 365 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 RPL8P62917 257 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 CLEC2AQ6UVW9 174 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 OR5B3Q8NH48 314 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 TMEM147Q9BVK8 224 aa16.57■□□□□ 0.24
LYSMD2-201ENST00000267838 UBE2L5PA0A1B0GUS4 154 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 A0A1W2PPI3 338 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 NDUFS6O75380 124 aaKnown RBP16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 OPN1MWP04001 364 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 OPN1MW2P0DN77 364 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 OPN1MW3P0DN78 364 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 CEACAM3P40198 252 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 TAF15Q92804 592 aaKnown RBP eCLIP16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 PLEKHA3Q9HB20 300 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 GSN-AS1Q9NRJ2 163 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 VWC2LB2RUY7 222 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 RRHO14718 337 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 HOXB4P17483 251 aaPredicted RBP16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 CDX1P47902 265 aaPredicted RBP16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 RND2P52198 227 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 ZNF726P1Q15940 193 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 LCN15Q6UWW0 184 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 CENPVQ7Z7K6 275 aaPredicted RBP16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 NRGNQ92686 78 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 COMMD5Q9GZQ3 224 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 CTDSP1Q9GZU7 261 aa16.56■□□□□ 0.24
LYSMD2-201ENST00000267838 UTP20O75691 2785 aaKnown RBP16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 CLDN34H7C241 214 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 SLC25A17O43808 307 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 CXCL1P09341 107 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 SLC24A4Q8NFF2 622 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 TMEM170AQ8WVE7 144 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 PERPQ96FX8 193 aa16.55■□□□□ 0.24
LYSMD2-201ENST00000267838 A0A1W2PRD5 423 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 A0A1W2PRF3 423 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 A0A1W2PRM7 423 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 TOX4O94842 621 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 MBP02144 154 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 VWC2Q2TAL6 325 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 ZNF343Q6P1L6 599 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 LHFPL4Q7Z7J7 247 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 VSIRQ9H7M9 311 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 ZNF430Q9H8G1 570 aaPredicted RBP16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 POLR3KQ9Y2Y1 108 aaPredicted RBP16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 HILPDAQ9Y5L2 63 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 LRRK2Q5S007 2527 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 IGHV4-61A0A0C4DH41 118 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 NPY1RP25929 384 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 S100A2P29034 98 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 TEX45Q8NA69 505 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 OR1L8Q8NGR8 309 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 SDF2L1Q9HCN8 221 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 NDUFA4L2Q9NRX3 87 aa16.54■□□□□ 0.24
LYSMD2-201ENST00000267838 ELOA3CA0A087WX78 387 aaPredicted RBP16.53■□□□□ 0.24
LYSMD2-201ENST00000267838 TIMM23O14925 209 aa16.53■□□□□ 0.24
LYSMD2-201ENST00000267838 CYB5BO43169 146 aa16.53■□□□□ 0.24
LYSMD2-201ENST00000267838 PAX1P15863 534 aa16.53■□□□□ 0.24
LYSMD2-201ENST00000267838 TPSG1Q9NRR2 321 aa16.53■□□□□ 0.24
LYSMD2-201ENST00000267838 TGIF2-C20orf24A0A0A6YYL0 155 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 SEC14L6B5MCN3 397 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 PRSS46E5RG02 174 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 CA2P00918 260 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 PLA2G2AP14555 144 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 CNTFRP26992 372 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 NDUFA6P56556 154 aa16.52■□□□□ 0.24
LYSMD2-201ENST00000267838 PSG5Q15238 335 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms