RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SRSF8Q9BRL6 282 aaKnown RBP17.96■□□□□ 0.47
UFD1-201ENST00000263202 TMUB1Q9BVT8 246 aa17.96■□□□□ 0.47
UFD1-201ENST00000263202 ZNF471Q9BX82 626 aaPredicted RBP17.96■□□□□ 0.47
UFD1-201ENST00000263202 APELAP0DMC3 54 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 AREGP15514 252 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 HNF1AP20823 631 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 SNCAP37840 140 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 C2orf83Q53S99 150 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 C16orf82Q7Z2V1 217 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 MRPL41Q8IXM3 137 aaKnown RBP17.95■□□□□ 0.46
UFD1-201ENST00000263202 FAM103A1Q9BTL3 118 aaKnown RBP17.95■□□□□ 0.46
UFD1-201ENST00000263202 REG1AP05451 166 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 RAB11AP62491 216 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 HBG1P69891 147 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 HBG2P69892 147 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 CLINT1Q14677 625 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 RPL7L1Q6DKI1 246 aaKnown RBP17.95■□□□□ 0.46
UFD1-201ENST00000263202 HSD17B13Q7Z5P4 300 aaPredicted RBP17.95■□□□□ 0.46
UFD1-201ENST00000263202 NAV3Q8IVL0 2385 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 TLN2Q9Y4G6 2542 aa17.95■□□□□ 0.46
UFD1-201ENST00000263202 SH2D7A6NKC9 451 aaPredicted RBP17.94■□□□□ 0.46
UFD1-201ENST00000263202 ATP5IP56385 69 aaPredicted RBP17.94■□□□□ 0.46
UFD1-201ENST00000263202 ETV3LQ6ZN32 361 aa17.94■□□□□ 0.46
UFD1-201ENST00000263202 OR10P1Q8NGE3 313 aa17.94■□□□□ 0.46
UFD1-201ENST00000263202 SLA2Q9H6Q3 261 aa17.94■□□□□ 0.46
UFD1-201ENST00000263202 FBXO7Q9Y3I1 522 aa17.94■□□□□ 0.46
UFD1-201ENST00000263202 PRSS46E5RG02 174 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 CD99P14209 185 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 SLC38A11Q08AI6 406 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 ABHD5Q8WTS1 349 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 P2RX4Q99571 388 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 BTBD17A6NE02 478 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 M0QZK8 103 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 SCAF4O95104 1147 aaKnown RBP17.93■□□□□ 0.46
UFD1-201ENST00000263202 EGR2P11161 476 aaPredicted RBP17.93■□□□□ 0.46
UFD1-201ENST00000263202 SIGLECL1Q8N7X8 197 aa17.93■□□□□ 0.46
UFD1-201ENST00000263202 HOXA3O43365 443 aaPredicted RBP17.92■□□□□ 0.46
UFD1-201ENST00000263202 IFNA4P05014 189 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 FOSL1P15407 271 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 LILRB2Q8N423 598 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 ZNF114Q8NC26 417 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 STOML3Q8TAV4 291 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 ST8SIA2Q92186 375 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 PINX1Q96BK5 328 aaKnown RBP17.92■□□□□ 0.46
UFD1-201ENST00000263202 ATP5SQ99766 215 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 VPREB3Q9UKI3 123 aa17.92■□□□□ 0.46
UFD1-201ENST00000263202 JTBO76095 146 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 CFDP00746 253 aaPredicted RBP17.91■□□□□ 0.46
UFD1-201ENST00000263202 SUB1P53999 127 aaKnown RBP eCLIP17.91■□□□□ 0.465e-8■□□□□ 8.7
UFD1-201ENST00000263202 UBA52P62987 128 aaKnown RBP17.91■□□□□ 0.46
UFD1-201ENST00000263202 ASPHD1Q5U4P2 390 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 TNFRSF19Q9NS68 423 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 MXRA5Q9NR99 2828 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 FLNBO75369 2602 aaKnown RBP17.91■□□□□ 0.46
UFD1-201ENST00000263202 TEX261Q6UWH6 196 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 UBAC2Q8NBM4 344 aa17.91■□□□□ 0.46
UFD1-201ENST00000263202 BORCS7-ASMTA0A0B4J1R7 106 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 LINC01548A6NM66 108 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 DFFBO76075 338 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 ZNF266Q14584 549 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 ATP6V1FQ16864 119 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 C19orf35Q6ZS72 473 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 SGMS2Q8NHU3 365 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 PARP11Q9NR21 331 aa17.9■□□□□ 0.46
UFD1-201ENST00000263202 ATP6V0E1O15342 81 aa17.89■□□□□ 0.45
UFD1-201ENST00000263202 TPT1P13693 172 aaKnown RBP17.89■□□□□ 0.45
UFD1-201ENST00000263202 CTRB1P17538 263 aa17.89■□□□□ 0.45
UFD1-201ENST00000263202 PVRIGQ6DKI7 326 aa17.89■□□□□ 0.45
UFD1-201ENST00000263202 CTRB2Q6GPI1 263 aa17.89■□□□□ 0.45
UFD1-201ENST00000263202 F11RQ9Y624 299 aaKnown RBP17.89■□□□□ 0.45
UFD1-201ENST00000263202 MFAP2P55001 183 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 BLCAPP62952 87 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 BAP18Q8IXM2 172 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 LFNGQ8NES3 379 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 OR1P1Q8NH06 330 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 CRYGCP07315 174 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 VWC2Q2TAL6 325 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 TMEM147Q9BVK8 224 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 ARV1Q9H2C2 271 aa17.88■□□□□ 0.45
UFD1-201ENST00000263202 NPIPB5A8MRT5 1133 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 EIF5AP63241 154 aaKnown RBP17.87■□□□□ 0.45
UFD1-201ENST00000263202 DLK1P80370 383 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 C9orf152Q5JTZ5 239 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 TTC9CQ8N5M4 171 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 ZNF680Q8NEM1 530 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 GGACTQ9BVM4 153 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 WNT10AQ9GZT5 417 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 DMRT1Q9Y5R6 373 aa17.87■□□□□ 0.45
UFD1-201ENST00000263202 SONP18583 2426 aaKnown RBP17.87■□□□□ 0.45
UFD1-201ENST00000263202 IGHG2P01859 326 aa17.86■□□□□ 0.45
UFD1-201ENST00000263202 RNASEH2CQ8TDP1 164 aaKnown RBP17.86■□□□□ 0.45
UFD1-201ENST00000263202 UQCC1Q9NVA1 299 aa17.86■□□□□ 0.45
UFD1-201ENST00000263202 FBXO24O75426 580 aa17.86■□□□□ 0.45
UFD1-201ENST00000263202 EXOSC2Q13868 293 aaKnown RBP17.86■□□□□ 0.45
UFD1-201ENST00000263202 GINS3Q9BRX5 216 aa17.86■□□□□ 0.45
UFD1-201ENST00000263202 UBE2L5PA0A1B0GUS4 154 aa17.85■□□□□ 0.45
UFD1-201ENST00000263202 IFNA5P01569 189 aa17.85■□□□□ 0.45
UFD1-201ENST00000263202 ARSJQ5FYB0 599 aaPredicted RBP17.85■□□□□ 0.45
UFD1-201ENST00000263202 Q6ZS46 218 aa17.85■□□□□ 0.45
UFD1-201ENST00000263202 TMEM86BQ8N661 226 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms