RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 IER3P46695 156 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 ZNF83P51522 516 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 UCNP55089 124 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 TCL1AP56279 114 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 KIAA1644Q3SXP7 199 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 ZNF718Q3SXZ3 478 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 Q5PR19 223 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 TMEM144Q7Z5S9 345 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 STPG3Q8N7X2 389 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 SLC35E1Q96K37 410 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 TBX15Q96SF7 602 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 CLCF1Q9UBD9 225 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 IGKV3-15P01624 115 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 STAG3L2P0CL84 134 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 STAG3L3P0CL85 134 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 FXYD3Q14802 87 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 Q6ZS92 163 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 MIR17HGQ75NE6 70 aa8.27□□□□□ -1.09
LIG3-201ENST00000262327 SNRNP40Q96DI7 357 aaKnown RBP8.27□□□□□ -1.09
LIG3-201ENST00000262327 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
LIG3-201ENST00000262327 PLXNB1O43157 2135 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 IGHV2OR16-5A0A0B4J2B6 119 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 IGHV1-18A0A0C4DH31 117 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 OR10J4P0C629 311 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 GCHFRP30047 84 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 EFNB3Q15768 340 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 TOMM20LQ6UXN7 152 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 TP53TG3Q9ULZ0 132 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 DSCAMO60469 2012 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 CA2P00918 260 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 OR10J1P30954 320 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 CDKN1AP38936 164 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 OPRK1P41145 380 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 UBE2V1Q13404 147 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 KRTCAP3Q53RY4 240 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 Q6ZVH6 145 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 DOLPP1Q86YN1 238 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 GCSAMQ8N6F7 178 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 CMTM2Q8TAZ6 248 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 OR2V2Q96R30 315 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 RNF2Q99496 336 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 TMPRSS2O15393 492 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 SERF1AO75920 110 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 CXorf1O96002 111 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 ADH4P08319 380 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 LCN2P80188 198 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 NHLRC2Q8NBF2 726 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 CORO2AQ92828 525 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 RNASE7Q9H1E1 156 aaKnown RBP8.26□□□□□ -1.09
LIG3-201ENST00000262327 GCM1Q9NP62 436 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 PAM16Q9Y3D7 125 aa8.26□□□□□ -1.09
LIG3-201ENST00000262327 PRSS46E5RG02 174 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 FCN1O00602 326 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 IGHV3-48P01763 117 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CRYBB3P26998 211 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CCKARP32238 428 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 TMPRSS3P57727 454 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 LOXL3P58215 753 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 LINC00310P59036 64 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 Q6ZWC4 215 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 OR8I2Q8N0Y5 310 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 STPG4Q8N801 248 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 ORAOV1Q8WV07 137 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 HSPB9Q9BQS6 159 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 MRPL18Q9H0U6 180 aaKnown RBP8.25□□□□□ -1.09
LIG3-201ENST00000262327 KALRNO60229 2985 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 SAA2-SAA4A0A096LPE2 208 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 M0R1B8 84 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 SAA2P0DJI9 122 aaPredicted RBP8.25□□□□□ -1.09
LIG3-201ENST00000262327 NPY1RP25929 384 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 HTD2P86397 168 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 FOXL1Q12952 345 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 PSG5Q15238 335 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 MMDQ15546 238 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 TBR1Q16650 682 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CT45A1Q5HYN5 189 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 OR4A47Q6IF82 309 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CT45A3Q8NHU0 189 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 RND1Q92730 232 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 PIEZO2Q9H5I5 2752 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 NPVFQ9HCQ7 196 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 CALYQ9NYX4 217 aa8.25□□□□□ -1.09
LIG3-201ENST00000262327 SNURFLB1AK76 121 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 MMP23AO75900 390 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 CRISP2P16562 243 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 TEPPQ6URK8 271 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 FAM90A1Q86YD7 464 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 RPRMLQ8N4K4 120 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 VN1R17PQ8TDU5 208 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 NAV3Q8IVL0 2385 aa8.24□□□□□ -1.09
LIG3-201ENST00000262327 CA1P00915 261 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms