RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ZNF816Q0VGE8 651 aaPredicted RBP22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 ANKRD55Q3KP44 614 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 GGNBP1Q5YKI7 109 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 ZNF66Q6ZN08 573 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 SHPKQ9UHJ6 478 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 S100GP29377 79 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 CEACAM3P40198 252 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 PITPNC1Q9UKF7 332 aa22.12■■□□□ 1.13
SMARCD3-201ENST00000262188 SFT2D2O95562 160 aa22.11■■□□□ 1.13
SMARCD3-201ENST00000262188 FABP4P15090 132 aa22.11■■□□□ 1.13
SMARCD3-201ENST00000262188 ZNF674Q2M3X9 581 aa22.11■■□□□ 1.13
SMARCD3-201ENST00000262188 UMAD1C9J7I0 102 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 H0YJW9 148 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 DFFBO76075 338 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 IGKV1-16P04430 117 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 CDKN1BP46527 198 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 THBS3P49746 956 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 ZNF585BQ52M93 769 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 GZMBP10144 247 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 SNCAP37840 140 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 CATR1Q13166 79 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 TMEM187Q14656 261 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 FAM71F2Q6NXP2 309 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 RCC1LQ96I51 464 aaKnown RBP22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 RITA1Q96K30 269 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 SLC25A31Q9H0C2 315 aa22.1■■□□□ 1.13
SMARCD3-201ENST00000262188 CIDEAO60543 219 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 ERVFC1-1P60608 527 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 CFHR4Q92496 578 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 SEC22AQ96IW7 307 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 HIST1H2BLQ99880 126 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 PBDC1Q9BVG4 233 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 SLC35B3Q9H1N7 401 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 SLC35D1Q9NTN3 355 aa22.09■■□□□ 1.13
SMARCD3-201ENST00000262188 H0Y980 276 aa22.08■■□□□ 1.13
SMARCD3-201ENST00000262188 NPSP0C0P6 89 aa22.08■■□□□ 1.13
SMARCD3-201ENST00000262188 LIN7CQ9NUP9 197 aaKnown RBP22.08■■□□□ 1.13
SMARCD3-201ENST00000262188 IGKV1-39P01597 117 aa22.08■■□□□ 1.12
SMARCD3-201ENST00000262188 IGKV1D-39P04432 117 aa22.08■■□□□ 1.12
SMARCD3-201ENST00000262188 PRSS54Q6PEW0 395 aa22.08■■□□□ 1.12
SMARCD3-201ENST00000262188 OR5AN1Q8NGI8 311 aa22.08■■□□□ 1.12
SMARCD3-201ENST00000262188 F8P00451 2351 aa22.08■■□□□ 1.12
SMARCD3-201ENST00000262188 A0A1W2PN81 502 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 RNF212BA8MTL3 300 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 S1PR2O95136 353 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 CHRNA7P36544 502 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 GUK1Q16774 197 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 DEFB112Q30KQ8 113 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 TMEM222Q9H0R3 208 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 TSPAN15O95858 294 aa22.07■■□□□ 1.12
SMARCD3-201ENST00000262188 PET100P0DJ07 73 aa22.06■■□□□ 1.12
SMARCD3-201ENST00000262188 RBX1P62877 108 aa22.06■■□□□ 1.12
SMARCD3-201ENST00000262188 VKORC1L1Q8N0U8 176 aa22.06■■□□□ 1.12
SMARCD3-201ENST00000262188 RNF126Q9BV68 326 aa22.06■■□□□ 1.12
SMARCD3-201ENST00000262188 SCRT1Q9BWW7 348 aa22.06■■□□□ 1.12
SMARCD3-201ENST00000262188 UCP1P25874 307 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 SRP14P37108 136 aaKnown RBP22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 LFNGQ8NES3 379 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 ADTRPQ96IZ2 230 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 SERPINE2P07093 398 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 Q6ZRG5 221 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 THNSL2Q86YJ6 484 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 CUBNO60494 3623 aa22.05■■□□□ 1.12
SMARCD3-201ENST00000262188 HSBP1L1C9JCN9 74 aa22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 DUS4LO95620 317 aaKnown RBP22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 APOA2P02652 100 aa22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 TMEM268Q5VZI3 342 aa22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 LIAT1Q6ZQX7 453 aa22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 ZNF48Q96MX3 618 aaPredicted RBP22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 HIVEP2P31629 2446 aa22.04■■□□□ 1.12
SMARCD3-201ENST00000262188 VENTXO95231 258 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 IGKV1D-33P01593 117 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 IGKV1-33P01594 117 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 CNTFRP26992 372 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 IZUMO4Q1ZYL8 232 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 TMEM183AQ8IXX5 376 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 WASHC3Q9Y3C0 194 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 MTORP42345 2549 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 ELOBQ15370 118 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 CCDC144NLQ6NUI1 221 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 LYZL2Q7Z4W2 148 aa22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 SELENOHQ8IZQ5 122 aaKnown RBP22.03■■□□□ 1.12
SMARCD3-201ENST00000262188 NAV3Q8IVL0 2385 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 SRRM4A7MD48 611 aaKnown RBP22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 OOSP1A8MZH6 123 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 CCSO14618 274 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 HES1Q14469 280 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 RTL8BQ17RB0 113 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 PLEKHA2Q9HB19 425 aa22.02■■□□□ 1.12
SMARCD3-201ENST00000262188 JTBO76095 146 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 CDS2O95674 445 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 KRASP01116 189 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 G6PCP35575 357 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 SLC35G3Q8N808 338 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 OR4S2Q8NH73 311 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 FAM212BQ9NTI7 297 aaPredicted RBP22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 MAST4O15021 2626 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 INAFM1C9JVW0 142 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 ZNF695Q8IW36 515 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 PIFOQ8TCI5 191 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms