RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 FMC1Q96HJ9 113 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 H3BQ15 152 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 OR13C6PQ8NH95 151 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 C1QTNF4Q9BXJ3 329 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 C7orf66A4D0T2 115 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 CD7P09564 240 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 CSRP3P50461 194 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 RND3P61587 244 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
PDGFRB-201ENST00000261799 AWAT1Q58HT5 328 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 SIGIRRQ6IA17 410 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 LINC00527Q9UJ94 153 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 OVOL1O14753 267 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 FAM110DQ8TAY7 271 aaPredicted RBP11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 ARID1BQ8NFD5 2236 aaPredicted RBP11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 FAM223BA6NKX1 122 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 TCF15Q12870 199 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 PIP4P1Q86T03 277 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 FAM223AQ8IWN6 122 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 MT-ND6P03923 174 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 LINC00271P0C7V0 271 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 CRYBB3P26998 211 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 RNF5Q99942 180 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 OR5AC2Q9NZP5 309 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 GCHFRP30047 84 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 CR1LQ2VPA4 569 aa11.3□□□□□ -0.6
PDGFRB-201ENST00000261799 H3BVH4 76 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 COL8A2P25067 703 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 FAM169BQ8N8A8 192 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 MRPL13Q9BYD1 178 aaKnown RBP11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 IFITM10A6NMD0 228 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 NMUP48645 174 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
PDGFRB-201ENST00000261799 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 IGFBP2P18065 325 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 A6NDN8 102 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 HLA-DQB1P01920 261 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 FOXB2Q5VYV0 432 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 RNF125Q96EQ8 232 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 KLK15Q9H2R5 256 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 E7EQL1 145 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 C1QL2Q7Z5L3 287 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
PDGFRB-201ENST00000261799 PDCD11Q14690 1871 aaKnown RBP11.27□□□□□ -0.6
PDGFRB-201ENST00000261799 TDRD6O60522 2096 aaKnown RBP11.27□□□□□ -0.6
PDGFRB-201ENST00000261799 CLRN3Q8NCR9 226 aa11.27□□□□□ -0.6
PDGFRB-201ENST00000261799 OTORQ9NRC9 128 aa11.27□□□□□ -0.6
PDGFRB-201ENST00000261799 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 C15orf61A6NNL5 157 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 ZNF79Q15937 498 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 RGP1Q92546 391 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 RP1L1Q8IWN7 2480 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 PIN1P1O15428 100 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 GATA4P43694 442 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 AQP10Q96PS8 301 aa11.27□□□□□ -0.61
PDGFRB-201ENST00000261799 CIDEAO60543 219 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 TFF1P04155 84 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 SRRM5B3KS81 715 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 CACNG7P62955 275 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 OR11H7Q8NGC8 314 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 ANKRD36A6QL64 1941 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms