RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FAM120AOSQ5T036 256 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 FAM162BQ5T6X4 162 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PRAMEF5Q5TYX0 476 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PRAMEF6Q5VXH4 476 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LINC00173Q6ZV60 143 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 TSTD1Q8NFU3 115 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 OR4A16Q8NH70 328 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CLUHP3Q96NS8 147 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 OR2V2Q96R30 315 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 C1RLQ9NZP8 487 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 MMP17Q9ULZ9 603 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PRSS46E5RG02 174 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 H0Y8G0 127 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 J3QT63 122 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 DNPH1O43598 174 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 HBZP02008 142 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 P04436 131 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CELA2AP08217 269 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 HTR1DP28221 377 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 HOXC12P31275 282 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 YRDCQ86U90 279 aaKnown RBP5.97□□□□□ -1.45
CSDE1-201ENST00000261443 WDR31Q8NA23 367 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 NUP35Q8NFH5 326 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 OR52E5Q8NH55 327 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 C1orf159Q96HA4 380 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PRRG4Q9BZD6 226 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PKIBQ9C010 78 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LSM4Q9Y4Z0 139 aaKnown RBP5.97□□□□□ -1.45
CSDE1-201ENST00000261443 MPC1Q9Y5U8 109 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 GVINP1Q7Z2Y8 2422 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 RP1L1Q8IWN7 2480 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CACNA1EQ15878 2313 aa5.96□□□□□ -1.45
CSDE1-201ENST00000261443 HCFC1P51610 2035 aa5.96□□□□□ -1.45
CSDE1-201ENST00000261443 ATMQ13315 3056 aa5.96□□□□□ -1.45
CSDE1-201ENST00000261443 IGHV1-24A0A0C4DH33 117 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 C21orf140B9A014 251 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 OR2J3O76001 311 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 WISP2O76076 250 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 HAND1O96004 215 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 UQCRFS1P47985 274 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 SEC11AP67812 179 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 RNFT1Q5M7Z0 435 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 FAM214BQ7L5A3 538 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 URB1-AS1Q96HZ7 61 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 IGF2BP2-AS1Q96M15 143 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 CDX2Q99626 313 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-201ENST00000261443 HSD17B10Q99714 261 aaKnown RBP5.96□□□□□ -1.46
CSDE1-201ENST00000261443 MCRIP2Q9BUT9 160 aaKnown RBP5.96□□□□□ -1.46
CSDE1-201ENST00000261443 MS4A6AQ9H2W1 248 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 PROK2Q9HC23 129 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 SLC25A10Q9UBX3 287 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-201ENST00000261443 ZNF835Q9Y2P0 537 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 OR51B2Q9Y5P1 312 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 MED12LQ86YW9 2145 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 GGTLC3B5MD39 225 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 C12orf77C9JDV5 145 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 SCRG1O75711 98 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 Q5PR19 223 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 PRR31Q5SQ13 230 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 BPIFA4PQ86YQ2 179 aa5.96□□□□□ -1.46
CSDE1-201ENST00000261443 C9orf172C9J069 976 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SNAI2O43623 268 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 GFRA3O60609 400 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 VDAC2P45880 294 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-201ENST00000261443 WIPI1Q5MNZ9 446 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-201ENST00000261443 TRAT1Q6PIZ9 186 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SSX8Q7RTT4 187 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 TMEM251Q8N6I4 163 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 MAP1LC3CQ9BXW4 147 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 DUSP13Q9UII6 198 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 AHCTF1Q8WYP5 2266 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 TMEM30CPA0ZSE6 113 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 AHRRA9YTQ3 701 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 H3BUT2 72 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 FCGR3BO75015 233 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SRFP11831 508 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 IGFBP2P18065 325 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 FOXA3P55318 350 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-201ENST00000261443 TMEM97Q5BJF2 176 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SLC35E4Q6ICL7 350 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 NEGR1Q7Z3B1 354 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 OR10D3Q8NH80 312 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 FAM216AQ8WUB2 273 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 CT55Q8WUE5 264 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SNRNP40Q96DI7 357 aaKnown RBP5.95□□□□□ -1.46
CSDE1-201ENST00000261443 GRAMD2BQ96HH9 432 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SH3BGRL2Q9UJC5 107 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 PSG11Q9UQ72 335 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 FREM1Q5H8C1 2179 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 SPTBN2O15020 2390 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 CACNA1GO43497 2377 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 IGHV3-43A0A0B4J1X8 118 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 IGHV3-64DA0A0J9YX35 117 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 HIGD1CA8MV81 97 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 DEFB108AA8MXU0 73 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 K7EP34 96 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 IGHV3-43DP0DP04 118 aa5.95□□□□□ -1.46
CSDE1-201ENST00000261443 HIST1H1EP10412 219 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms