RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PRNDQ9UKY0 176 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 LOC102724200A0A096LPH7 203 aaPredicted RBP14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 K7EIM0 57 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 ADMP35318 185 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 Q56UQ5 140 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 C5orf66Q9H5L9 145 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 TMEM14BQ9NUH8 114 aa14.18□□□□□ -0.14
TM6SF1-201ENST00000258909 C15orf61A6NNL5 157 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 M0QYG6 137 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 IGKV1-39P01597 117 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 IGKV1D-39P04432 117 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 OR2C3Q8N628 320 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 OR5B3Q8NH48 314 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 TMEM56Q96MV1 263 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 SCPEP1Q9HB40 452 aa14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 DAZ1Q9NQZ3 744 aaKnown RBP14.17□□□□□ -0.14
TM6SF1-201ENST00000258909 S100GP29377 79 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 RCVRNP35243 200 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 LPCAT3Q6P1A2 487 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 SPSB3Q6PJ21 355 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 CADM3Q8N126 398 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 IL17DQ8TAD2 202 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 SEC22AQ96IW7 307 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 OVOL2Q9BRP0 275 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 FKBP11Q9NYL4 201 aa14.16□□□□□ -0.14
TM6SF1-201ENST00000258909 NDUFA4O00483 81 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 H2BFWTQ7Z2G1 175 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 SLC38A6Q8IZM9 456 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 OR4A16Q8NH70 328 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 MRGPRFQ96AM1 343 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 CMTM3Q96MX0 182 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 TSC22D3Q99576 134 aa14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 SPAG8Q99932 426 aaPredicted RBP14.15□□□□□ -0.14
TM6SF1-201ENST00000258909 TSPAN4O14817 238 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 CTSGP08311 255 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 IZUMO4Q1ZYL8 232 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 OR1P1Q8NH06 330 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 ZNF414Q96IQ9 312 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 NAA50Q9GZZ1 169 aaKnown RBP14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 BIRC6Q9NR09 4857 aa14.14□□□□□ -0.15
TM6SF1-201ENST00000258909 FAM25AB3EWG3 89 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 FAM25CB3EWG5 89 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 FAM25GB3EWG6 89 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 PI3P19957 117 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 RORCP51449 518 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 LAMTOR1Q6IAA8 161 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 KLK11Q9UBX7 282 aa14.13□□□□□ -0.15
TM6SF1-201ENST00000258909 IGHV3-49A0A0A0MS15 119 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 UCP3P55916 312 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 ATP6V0BQ99437 205 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 FAM212BQ9NTI7 297 aaPredicted RBP14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 ALMS1Q8TCU4 4167 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 I3L2K1 104 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 K7EMT4 169 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 JTBO76095 146 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 YIF1AO95070 293 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 CTSDP07339 412 aaPredicted RBP14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 ODF3L2Q3SX64 289 aa14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 PINX1Q96BK5 328 aaKnown RBP14.12□□□□□ -0.15
TM6SF1-201ENST00000258909 MT-CO2P00403 227 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 PGAM2P15259 253 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 HSPE1P61604 102 aaKnown RBP14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 PRCDQ00LT1 54 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 DEFB135Q30KP9 77 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 OR52I2Q8NH67 350 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 RNF2Q99496 336 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 SMPXQ9UHP9 88 aa14.11□□□□□ -0.15
TM6SF1-201ENST00000258909 IGHV3OR16-13A0A075B7E8 117 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 IGHV3-74A0A0B4J1X5 117 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 C15orf62A8K5M9 175 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 NUPL2O15504 423 aaKnown RBP14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 CD3DP04234 171 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 RPL35AP18077 110 aaKnown RBP14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 MFAP4P55083 255 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 MZT2AQ6P582 158 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 EXTL2Q9UBQ6 330 aa14.1□□□□□ -0.15
TM6SF1-201ENST00000258909 IGKV3-7A0A075B6H7 116 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 OR4C46A6NHA9 309 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 IGKV1-5P01602 117 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 TFPI2P48307 235 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 APOC4P55056 127 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 PIGPP57054 158 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 EWSR1Q01844 656 aaKnown RBP eCLIP14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 RELQ04864 619 aaPredicted RBP14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 CTF1Q16619 201 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 RNASE10Q5GAN6 216 aaKnown RBP14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 TP53RKQ96S44 253 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 RHPN1-AS1Q9BWJ2 59 aa14.09□□□□□ -0.15
TM6SF1-201ENST00000258909 IGHV7-4-1A0A0J9YVY3 117 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 A0A0J9YWU9 116 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 CHEK1O14757 476 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 SPRY2O43597 315 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 SMIM18P0DKX4 95 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 PPP5CP53041 499 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 ERHP84090 104 aaKnown RBP14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
TM6SF1-201ENST00000258909 ZNF124Q15973 351 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms