RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 LINC00869P0C866 280 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 GNG4P50150 75 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 UTF1Q5T230 341 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 SNRPCP09234 159 aaKnown RBP12.86□□□□□ -0.35
RFX1-201ENST00000254325 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 P0C879 139 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 FABP4P15090 132 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 ZNF600Q6ZNG1 722 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 OR10G8Q8NGN5 311 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 MED13LQ71F56 2210 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
RFX1-201ENST00000254325 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 BET1LQ9NYM9 111 aa12.86□□□□□ -0.35
RFX1-201ENST00000254325 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 ARF6P62330 175 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 SUMO1P63165 101 aaKnown RBP12.85□□□□□ -0.35
RFX1-201ENST00000254325 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 ZNF596Q8TC21 504 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 ZNF257Q9Y2Q1 563 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 DYSFO75923 2080 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 FABP1P07148 127 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 AGAP20933 346 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 RND2P52198 227 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
RFX1-201ENST00000254325 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 SPOCK3Q9BQ16 436 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 TMEM133Q9H2Q1 129 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 METTL1Q9UBP6 276 aaKnown RBP12.85□□□□□ -0.35
RFX1-201ENST00000254325 ABCA1O95477 2261 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 ATP5IP56385 69 aaPredicted RBP12.85□□□□□ -0.35
RFX1-201ENST00000254325 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 OR1B1Q8NGR6 318 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 HILPDAQ9Y5L2 63 aa12.85□□□□□ -0.35
RFX1-201ENST00000254325 ZNF705FA8MVS1 300 aaPredicted RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 SEC14L6B5MCN3 397 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 LGALS7P47929 136 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 PPOXP50336 477 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 EFNB3Q15768 340 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 PNKDQ8N490 385 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 H0YJW9 148 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 SMIM6P0DI80 62 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 HELTA6NFD8 242 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 MMDQ15546 238 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 CR1LQ2VPA4 569 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 RNF2Q99496 336 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 FUT9Q9Y231 359 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 RBP4P02753 201 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
RFX1-201ENST00000254325 SPATA31B1PQ5VZV4 182 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
RFX1-201ENST00000254325 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 CEACAM3P40198 252 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 CA7P43166 264 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 UBE2G1P62253 170 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 OR2T6Q8NHC8 308 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
RFX1-201ENST00000254325 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 TNCP24821 2201 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 VENTXO95231 258 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 PLA2G5P39877 138 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
RFX1-201ENST00000254325 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
RFX1-201ENST00000254325 NCBP2LA6PVI3 153 aaKnown RBP12.83□□□□□ -0.36
RFX1-201ENST00000254325 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 STAG3L3P0CL85 134 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 OR5AU1Q8NGC0 362 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 UBTD1Q9HAC8 227 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 MIOXQ9UGB7 285 aa12.83□□□□□ -0.36
RFX1-201ENST00000254325 CYB5R2Q6BCY4 276 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 CENPVQ7Z7K6 275 aaPredicted RBP12.82□□□□□ -0.36
RFX1-201ENST00000254325 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 SPINK4O60575 86 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 COL8A2P25067 703 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 MLANAQ16655 118 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 DDB2Q92466 427 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
RFX1-201ENST00000254325 LIPFP07098 398 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 C8orf88P0DMB2 117 aa12.82□□□□□ -0.36
RFX1-201ENST00000254325 CD69Q07108 199 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms