RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HPRT1P00492 218 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 BMI1P35226 326 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 CA7P43166 264 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 ZNF90Q03938 601 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 TOMM20LQ6UXN7 152 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 WDR82Q6UXN9 313 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 Q6ZWC4 215 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 Q8TCH9 128 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 C15orf65H3BRN8 121 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 ADH4P08319 380 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 RPL29P47914 159 aaKnown RBP13.95□□□□□ -0.18
FOXA1-201ENST00000250448 LINC00310P59036 64 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 MRPS11P82912 194 aaKnown RBP13.95□□□□□ -0.18
FOXA1-201ENST00000250448 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
FOXA1-201ENST00000250448 USP24Q9UPU5 2620 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 YPEL1O60688 119 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 HTD2P86397 168 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 ST6GALNAC3Q8NDV1 305 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 OR52E5Q8NH55 327 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 YPEL2Q96QA6 119 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
FOXA1-201ENST00000250448 ABCA4P78363 2273 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 DPRXA6NFQ7 191 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 PROP1O75360 226 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 GCHFRP30047 84 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 SMIM21Q3B7S5 101 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 MBNL2Q5VZF2 373 aaKnown RBP13.94□□□□□ -0.18
FOXA1-201ENST00000250448 C22orf15Q8WYQ4 148 aa13.94□□□□□ -0.18
FOXA1-201ENST00000250448 ANKHD1Q8IWZ3 2542 aaKnown RBP13.94□□□□□ -0.18
FOXA1-201ENST00000250448 ESDP10768 282 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 HLA-DRB5Q30154 266 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 TRAT1Q6PIZ9 186 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 ZNF705AQ6ZN79 300 aaPredicted RBP13.93□□□□□ -0.18
FOXA1-201ENST00000250448 SSMEM1Q8WWF3 244 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 FAM234AQ9H0X4 552 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 TET2Q6N021 2002 aaPredicted RBP13.93□□□□□ -0.18
FOXA1-201ENST00000250448 COL12A1Q99715 3063 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 K7EN84 100 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 CRISP2P16562 243 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 CD33P20138 364 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 ERVK-16P61578 105 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 RPL31P62899 125 aaKnown RBP13.93□□□□□ -0.18
FOXA1-201ENST00000250448 BSPH1Q075Z2 132 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 EDDM3AQ14507 147 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 M0R1X1 148 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 SLC17A3O00476 420 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 SERF1AO75920 110 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 IL6RP08887 468 aaPredicted RBP13.93□□□□□ -0.18
FOXA1-201ENST00000250448 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 VKORC1L1Q8N0U8 176 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 PLPPR2Q96GM1 343 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 C20orf144Q9BQM9 153 aa13.93□□□□□ -0.18
FOXA1-201ENST00000250448 DLEU1O43261 78 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 SPRY3O43610 288 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 RELBQ01201 579 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 SPATA31B1PQ5VZV4 182 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 MRPL52Q86TS9 123 aaKnown RBP13.92□□□□□ -0.18
FOXA1-201ENST00000250448 ABHD12Q8N2K0 398 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 OR1L6Q8NGR2 347 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 WFDC12Q8WWY7 111 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 C11orf52Q96A22 123 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 GNG12Q9UBI6 72 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
FOXA1-201ENST00000250448 M0QZK8 103 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 GLRXP35754 106 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 KLF3P57682 345 aaPredicted RBP13.92□□□□□ -0.18
FOXA1-201ENST00000250448 C1orf159Q96HA4 380 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
FOXA1-201ENST00000250448 TRAV3A0A0B4J244 114 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 LGALS4P56470 323 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 RHOBP62745 196 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 RANP62826 216 aaKnown RBP13.91□□□□□ -0.18
FOXA1-201ENST00000250448 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 LINC01560Q8TB33 94 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 TCF19Q9Y242 345 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 C9JCJ5 164 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 ADORA2A-AS1P86434 159 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 EFNB3Q15768 340 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 NPVFQ9HCQ7 196 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 TMEM140Q9NV12 185 aa13.91□□□□□ -0.18
FOXA1-201ENST00000250448 MT-CO2P00403 227 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 RPL39P5Q59GN2 51 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 S100A7AQ86SG5 101 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 ZCCHC24Q8N2G6 241 aaKnown RBP13.9□□□□□ -0.18
FOXA1-201ENST00000250448 STPG3Q8N7X2 389 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 UHRF2Q96PU4 802 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 JPT1Q9UK76 154 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 LY96Q9Y6Y9 160 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 TRGV10A0A0A0MS01 117 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 RPLP1P05386 114 aaKnown RBP13.9□□□□□ -0.18
FOXA1-201ENST00000250448 CDKN1AP38936 164 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 RPEL1Q2QD12 228 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 MORN2Q502X0 79 aa13.9□□□□□ -0.18
FOXA1-201ENST00000250448 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms