RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PDCD10Q9BUL8 212 aa18.64■□□□□ 0.57
SDF2L1-201ENST00000248958 PEMTQ9UBM1 199 aa18.64■□□□□ 0.57
SDF2L1-201ENST00000248958 SYNJ2BPP57105 145 aa18.63■□□□□ 0.57
SDF2L1-201ENST00000248958 SLC25A24Q6NUK1 477 aa18.63■□□□□ 0.57
SDF2L1-201ENST00000248958 VN1R17PQ8TDU5 208 aa18.63■□□□□ 0.57
SDF2L1-201ENST00000248958 SLC25A21Q9BQT8 299 aaPredicted RBP18.63■□□□□ 0.57
SDF2L1-201ENST00000248958 ZNF256Q9Y2P7 627 aaPredicted RBP18.63■□□□□ 0.57
SDF2L1-201ENST00000248958 INPP1P49441 399 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 ERHP84090 104 aaKnown RBP18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 ZNF57Q68EA5 555 aaPredicted RBP18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 IL22RA2Q969J5 263 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 CCDC140Q96MF4 163 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 PLEKHA3Q9HB20 300 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 SIGLEC8Q9NYZ4 499 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 DMRT1Q9Y5R6 373 aa18.62■□□□□ 0.57
SDF2L1-201ENST00000248958 PIGBOS1A0A0B4J2F0 54 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 ARL3P36405 182 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 CLEC19AQ6UXS0 136 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 OR2C3Q8N628 320 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 OR1P1Q8NH06 330 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 ATP6V0BQ99437 205 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 TMEM56-RWDD3S4R434 201 aa18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 PRKDCP78527 4128 aaKnown RBP18.61■□□□□ 0.57
SDF2L1-201ENST00000248958 A0A0B4J293 547 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 MFSD2BA6NFX1 497 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 INS-IGF2F8WCM5 200 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 IGHV3-23P01764 117 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 ANXA3P12429 323 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 DEFB121Q5J5C9 76 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 TRIQKQ629K1 86 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 GPHB5Q86YW7 130 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 SELENOHQ8IZQ5 122 aaKnown RBP18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 ZNF114Q8NC26 417 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 ZNF502Q8TBZ5 544 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 TMEM230Q96A57 120 aa18.6■□□□□ 0.57
SDF2L1-201ENST00000248958 NAP1L6A6NFF2 107 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 PPP5D1E7EU14 171 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 IFNA17P01571 189 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 AKR1C4P17516 323 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 IZUMO4Q1ZYL8 232 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 TMEM268Q5VZI3 342 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 SLC35G3Q8N808 338 aa18.59■□□□□ 0.57
SDF2L1-201ENST00000248958 LGALS9O00182 355 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 ST8SIA3O43173 380 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 IGLV1-51P01701 117 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 CLEC3BP05452 202 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 SRPXP78539 464 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 TMEM187Q14656 261 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 LHFPL5Q8TAF8 219 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 CACFD1Q9UGQ2 172 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 S4R3C0 116 aa18.58■□□□□ 0.56
SDF2L1-201ENST00000248958 A0A0G2JRQ6 117 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 LY86O95711 162 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 MFAP2P55001 183 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 BAK1Q16611 211 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 FAM106AQ4KMX7 169 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 TMEM128Q5BJH2 165 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 IL34Q6ZMJ4 242 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 OR52E5Q8NH55 327 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 PRR25Q96S07 402 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 ENY2Q9NPA8 101 aa18.57■□□□□ 0.56
SDF2L1-201ENST00000248958 OR2C1O95371 312 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 CSN3P07498 182 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 AARDQ4LEZ3 155 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 LINC00299Q6ZSB3 139 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 GAR1Q9NY12 217 aaKnown RBP18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 C21orf62Q9NYP8 219 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 DNAH3Q8TD57 4116 aa18.56■□□□□ 0.56
SDF2L1-201ENST00000248958 SPNP16150 400 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 GPR183P32249 361 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SNCAP37840 140 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SUB1P53999 127 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SPCS3P61009 180 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SUPT4H1P63272 117 aaKnown RBP18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 RBMS2Q15434 407 aaKnown RBP18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 PLET1Q6UQ28 207 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 TMED4Q7Z7H5 227 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 LGI3Q8N145 548 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SCARB1Q8WTV0 552 aa18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SDHCQ99643 169 aaPredicted RBP18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 C7orf50Q9BRJ6 194 aaKnown RBP18.55■□□□□ 0.56
SDF2L1-201ENST00000248958 SORL1Q92673 2214 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 A0A0B4J2A0 478 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 CENPXA8MT69 81 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 TGOLN2O43493 480 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 GP9P14770 177 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 SPSB3Q6PJ21 355 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 Q6ZRM9 215 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 OR2K2Q8NGT1 345 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 GPR146Q96CH1 333 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 BSCL2Q96G97 398 aaPredicted RBP18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 SHPKQ9UHJ6 478 aa18.54■□□□□ 0.56
SDF2L1-201ENST00000248958 K7EIM0 57 aa18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 HLA-AP01891 365 aaKnown RBP18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 HOXA1P49639 335 aaPredicted RBP18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 PALMDQ9NP74 551 aa18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 CACNG5Q9UF02 275 aa18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 LSM4Q9Y4Z0 139 aaKnown RBP18.53■□□□□ 0.56
SDF2L1-201ENST00000248958 DUXBA0A1W2PPF3 345 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms