RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 NABP2Q9BQ15 211 aa20.83■□□□□ 0.93
RAB40C-201ENST00000248139 MRPL20Q9BYC9 149 aaKnown RBP20.83■□□□□ 0.93
RAB40C-201ENST00000248139 UPK2O00526 184 aa20.83■□□□□ 0.92
RAB40C-201ENST00000248139 SPINK4O60575 86 aa20.83■□□□□ 0.92
RAB40C-201ENST00000248139 OR10J1P30954 320 aa20.83■□□□□ 0.92
RAB40C-201ENST00000248139 RPL29P47914 159 aaKnown RBP20.83■□□□□ 0.92
RAB40C-201ENST00000248139 SLC25A48Q6ZT89 311 aaKnown RBP20.83■□□□□ 0.92
RAB40C-201ENST00000248139 NEUROG1Q92886 237 aa20.83■□□□□ 0.92
RAB40C-201ENST00000248139 IRF2P14316 349 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 CHRNB4P30926 498 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 ADMP35318 185 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 PDLIM4P50479 330 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 RAB31Q13636 194 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 LRBAP50851 2863 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 CRYBB3P26998 211 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 LCN2P80188 198 aa20.82■□□□□ 0.92
RAB40C-201ENST00000248139 TSTD3H0UI37 97 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 CD99P14209 185 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ITGB1BP1O14713 200 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 FOXL1Q12952 345 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 IGFL3Q6UXB1 125 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 LINC00469Q8N7U9 141 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ZNF503Q96F45 646 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 SLC45A2Q9UMX9 530 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ABCA1O95477 2261 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 GATCO43716 136 aaKnown RBP20.81■□□□□ 0.92
RAB40C-201ENST00000248139 OR7C2O60412 319 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 TNFSF4P23510 183 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 PRCDQ00LT1 54 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ZNF90Q03938 601 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 OR5R1Q8NH85 324 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 OR2T6Q8NHC8 308 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 RNASEH2CQ8TDP1 164 aaKnown RBP20.81■□□□□ 0.92
RAB40C-201ENST00000248139 PRNDQ9UKY0 176 aa20.81■□□□□ 0.92
RAB40C-201ENST00000248139 ZZEF1O43149 2961 aa20.8■□□□□ 0.92
RAB40C-201ENST00000248139 PRB3Q04118 309 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-201ENST00000248139 C10orf55Q5SWW7 151 aa20.8■□□□□ 0.92
RAB40C-201ENST00000248139 SSBP2P81877 361 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-201ENST00000248139 MORN5Q5VZ52 161 aa20.8■□□□□ 0.92
RAB40C-201ENST00000248139 DOLPP1Q86YN1 238 aa20.8■□□□□ 0.92
RAB40C-201ENST00000248139 H1FXQ92522 213 aaKnown RBP20.8■□□□□ 0.92
RAB40C-201ENST00000248139 SLC25A10Q9UBX3 287 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-201ENST00000248139 CEACAM8P31997 349 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-201ENST00000248139 RTL8BQ17RB0 113 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 ADTRPQ96IZ2 230 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 SFXN3Q9BWM7 321 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 CEP295Q9C0D2 2601 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 TRAV5A0A0B4J249 113 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 DPRXA6NFQ7 191 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 SLC35B1P78383 322 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 CCL17Q92583 94 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 TMEM18Q96B42 140 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 HARBI1Q96MB7 349 aa20.79■□□□□ 0.92
RAB40C-201ENST00000248139 LYPD2Q6UXB3 125 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 GBGT1Q8N5D6 347 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 A0A0G2JNJ9 132 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 DLX1P56177 255 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 ADIPOQQ15848 244 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 EAF1Q96JC9 268 aaPredicted RBP20.78■□□□□ 0.92
RAB40C-201ENST00000248139 Q9UFV3 132 aa20.78■□□□□ 0.92
RAB40C-201ENST00000248139 hADV38S2A0JD32 116 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 FXYD3Q14802 87 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 RNASE7Q9H1E1 156 aaKnown RBP20.77■□□□□ 0.92
RAB40C-201ENST00000248139 RAB9BQ9NP90 201 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 A0A1B0GV90 55 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 ERVFC1-1P60608 527 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 POU2AF1Q16633 256 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 PQLC2Q6ZP29 291 aa20.77■□□□□ 0.92
RAB40C-201ENST00000248139 RNASE2P10153 161 aaKnown RBP20.76■□□□□ 0.91
RAB40C-201ENST00000248139 BSPH1Q075Z2 132 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 CENPWQ5EE01 88 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 FAM57AQ8TBR7 257 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 NCOR1P1Q9H4R4 102 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 DCHS2Q6V1P9 2916 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 KRTCAP3Q53RY4 240 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 TMEM200BQ69YZ2 307 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 LHFPL4Q7Z7J7 247 aa20.76■□□□□ 0.91
RAB40C-201ENST00000248139 SUMO1P63165 101 aaKnown RBP20.75■□□□□ 0.91
RAB40C-201ENST00000248139 SSX2Q16385 188 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 UHRF2Q96PU4 802 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 TXNDC17Q9BRA2 123 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 F2Z2F3 143 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 TMEM108Q6UXF1 575 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 REC114Q7Z4M0 266 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 NHLRC2Q8NBF2 726 aa20.75■□□□□ 0.91
RAB40C-201ENST00000248139 GGTLC3B5MD39 225 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 SCGB1D1O95968 90 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 IER3P46695 156 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 TCL1AP56279 114 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 TEX36Q5VZQ5 186 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 CORO2AQ92828 525 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 LINC00312Q9Y6C7 94 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 HELTA6NFD8 242 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 C17orf100A8MU93 164 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 MT-CO2P00403 227 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 OR8I2Q8N0Y5 310 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 LINC00479Q96M42 142 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 IL36BQ9NZH7 164 aa20.74■□□□□ 0.91
RAB40C-201ENST00000248139 TP53TG3Q9ULZ0 132 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms