RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 HLA-DQA1P01909 254 aa9.23□□□□□ -0.93
COPA-201ENST00000241704 FOXL1Q12952 345 aa9.23□□□□□ -0.93
COPA-201ENST00000241704 SRSF6Q13247 344 aaKnown RBP9.23□□□□□ -0.93
COPA-201ENST00000241704 OR1L1Q8NH94 360 aa9.23□□□□□ -0.93
COPA-201ENST00000241704 OTOGLQ3ZCN5 2332 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 SRIP30626 198 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 BPIFA4PQ86YQ2 179 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 SCRT1Q9BWW7 348 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 MRPS16Q9Y3D3 137 aaKnown RBP9.22□□□□□ -0.93
COPA-201ENST00000241704 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 LTBP2Q14767 1821 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 IGHV2OR16-5A0A0B4J2B6 119 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 PGLYRP1O75594 196 aaPredicted RBP9.22□□□□□ -0.93
COPA-201ENST00000241704 TSPOP30536 169 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 RPL27AP46776 148 aaKnown RBP9.22□□□□□ -0.93
COPA-201ENST00000241704 ID3Q02535 119 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 IL36BQ9NZH7 164 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 IGKV1-9A0A0C4DH69 117 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 LILRA1O75019 489 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 EGR1P18146 543 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 RBX1P62877 108 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 PSG7Q13046 419 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 ST6GALNAC3Q8NDV1 305 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 ZNF418Q8TF45 676 aaPredicted RBP9.22□□□□□ -0.93
COPA-201ENST00000241704 PYGO2Q9BRQ0 406 aa9.22□□□□□ -0.93
COPA-201ENST00000241704 HEATR1Q9H583 2144 aaKnown RBP9.22□□□□□ -0.93
COPA-201ENST00000241704 J3QR06 171 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 K7EP13 123 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 RHBDL1O75783 438 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 TPTE2P1Q5T6R2 138 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 Q6ZWC4 215 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 ZNF645Q8N7E2 425 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 PRSS33Q8NF86 280 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 CHTOPQ9Y3Y2 248 aaKnown RBP9.21□□□□□ -0.93
COPA-201ENST00000241704 CHEK1O14757 476 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 PSG1P11464 419 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 LOXL3P58215 753 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 MMD2Q8IY49 270 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 ABHD12Q8N2K0 398 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 ZNF525Q8N782 197 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 NABP1Q96AH0 204 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 LYZL4Q96KX0 146 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.93
COPA-201ENST00000241704 FANCMQ8IYD8 2048 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 A0A1B0GUS0 222 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 CRYGSP22914 178 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 HYPMO75409 117 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 SRSF10O75494 262 aaKnown RBP9.21□□□□□ -0.94
COPA-201ENST00000241704 AMMECR1LQ6DCA0 310 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 OR1B1Q8NGR6 318 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.94
COPA-201ENST00000241704 HELZP42694 1942 aaKnown RBP9.21□□□□□ -0.94
COPA-201ENST00000241704 IL18BPO95998 194 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 CLEC7AQ9BXN2 247 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SH2D2AQ9NP31 389 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 IGLC2P0DOY2 106 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 PAX1P15863 534 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 UCP1P25874 307 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 PCSK4Q6UW60 755 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 ZNF818PQ6ZRF7 136 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 MDS2Q8NDY4 140 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 DCTN5Q9BTE1 182 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SRCAPQ6ZRS2 3230 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SERTM2A0A1B0GWG4 89 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 CXorf1O96002 111 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
COPA-201ENST00000241704 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SLC35E4Q6ICL7 350 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 WFDC3Q8IUB2 231 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 TMEM204Q9BSN7 226 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 IDI2-AS1Q9NZ38 188 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 IQCF6A8MYZ5 107 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 K7ENP7 123 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 CELA3BP08861 270 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 LINC00869P0C866 280 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 ZNF324BQ6AW86 544 aaPredicted RBP9.2□□□□□ -0.94
COPA-201ENST00000241704 ZNRF1Q8ND25 227 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 FGFBP3Q8TAT2 258 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 CSTL1Q9H114 145 aa9.2□□□□□ -0.94
COPA-201ENST00000241704 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
COPA-201ENST00000241704 C17orf100A8MU93 164 aa9.19□□□□□ -0.94
COPA-201ENST00000241704 ZNF324O75467 553 aaPredicted RBP9.19□□□□□ -0.94
COPA-201ENST00000241704 NPY1RP25929 384 aa9.19□□□□□ -0.94
COPA-201ENST00000241704 B3GALT5-AS1P59052 145 aa9.19□□□□□ -0.94
COPA-201ENST00000241704 Q6ZS92 163 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms