RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 LINC00869P0C866 280 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 AREGP15514 252 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 ZNF90Q03938 601 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 RAB31Q13636 194 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 FAM201AQ5SY85 155 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 EAF1Q96JC9 268 aaPredicted RBP12.72□□□□□ -0.37
CTSD-201ENST00000236671 MS4A10Q96PG2 267 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 LY96Q9Y6Y9 160 aa12.72□□□□□ -0.37
CTSD-201ENST00000236671 AHRRA9YTQ3 701 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 FNDC10F2Z333 226 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 LINC00310P59036 64 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.37
CTSD-201ENST00000236671 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 DUX4L9Q6RFH8 374 aaPredicted RBP12.71□□□□□ -0.37
CTSD-201ENST00000236671 MIR17HGQ75NE6 70 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 ZNF439Q8NDP4 499 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 CMTM2Q8TAZ6 248 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 ITLN1Q8WWA0 313 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 UHRF2Q96PU4 802 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 MYO18BQ8IUG5 2567 aa12.71□□□□□ -0.37
CTSD-201ENST00000236671 KIR2DL5BA0A0G2JN68 375 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 KIR2DL5BA0A0G2JPC4 375 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 SPRY3O43610 288 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 LGALS4P56470 323 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 MRPS11P82912 194 aaKnown RBP12.71□□□□□ -0.38
CTSD-201ENST00000236671 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 ALKBH2Q6NS38 261 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 KIR2DL5AQ8N109 375 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 Q8NA96 180 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.38
CTSD-201ENST00000236671 HEATR1Q9H583 2144 aaKnown RBP12.71□□□□□ -0.38
CTSD-201ENST00000236671 SLC25A10Q9UBX3 287 aaPredicted RBP12.71□□□□□ -0.38
CTSD-201ENST00000236671 KLF3P57682 345 aaPredicted RBP12.7□□□□□ -0.38
CTSD-201ENST00000236671 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 FAM222BQ8WU58 562 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 MRPL18Q9H0U6 180 aaKnown RBP12.7□□□□□ -0.38
CTSD-201ENST00000236671 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 SLC45A2Q9UMX9 530 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 OR51B2Q9Y5P1 312 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 TENM4Q6N022 2769 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 M0R1B8 84 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 ACTL6BO94805 426 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 OR10J1P30954 320 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 ADTRPQ96IZ2 230 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 HINT2Q9BX68 163 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 V9GYV3 84 aa12.7□□□□□ -0.38
CTSD-201ENST00000236671 MBD3L4A6NDZ8 208 aaPredicted RBP12.69□□□□□ -0.38
CTSD-201ENST00000236671 MBD3L3A6NE82 208 aaPredicted RBP12.69□□□□□ -0.38
CTSD-201ENST00000236671 MBD3L5A6NJ08 208 aaPredicted RBP12.69□□□□□ -0.38
CTSD-201ENST00000236671 ESDP10768 282 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 GLRXP35754 106 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 ERVFC1-1P60608 527 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 ZADH2Q8N4Q0 377 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 OR1L6Q8NGR2 347 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 MBD3L2Q8NHZ7 208 aaPredicted RBP12.69□□□□□ -0.38
CTSD-201ENST00000236671 CORO2AQ92828 525 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 PCNX1Q96RV3 2341 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 DSCAMO60469 2012 aa12.69□□□□□ -0.38
CTSD-201ENST00000236671 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 GATA4P43694 442 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 PSG5Q15238 335 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 KRTCAP3Q53RY4 240 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 STUMQ69YW2 141 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 VHLLQ6RSH7 139 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 Q6ZWC4 215 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 MOB3BQ86TA1 216 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 MMD2Q8IY49 270 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 IGLV3-9A0A075B6K5 115 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 A8MXE2 369 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 GNG10P50151 68 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 OR5I1Q13606 314 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 IGFL3Q6UXB1 125 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 ZNF503Q96F45 646 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 TMEM167BQ9NRX6 74 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 CBLN4Q9NTU7 201 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
CTSD-201ENST00000236671 J3QR06 171 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 UPK2O00526 184 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 SERF1AO75920 110 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 CRISP2P16562 243 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
CTSD-201ENST00000236671 TIMM23BQ5SRD1 257 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 ZNF474Q6S9Z5 364 aaPredicted RBP12.67□□□□□ -0.38
CTSD-201ENST00000236671 Q6ZS92 163 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms