RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RUNX1Q01196 453 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 PAX2Q02962 417 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 CLEC12BQ2HXU8 276 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 TEPPQ6URK8 271 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 PRSS57Q6UWY2 283 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 SLC24A4Q8NFF2 622 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 RNASEH2CQ8TDP1 164 aaKnown RBP8.62□□□□□ -1.03
CDCA3-201ENST00000229265 ZDHHC16Q969W1 377 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 PLEKHA3Q9HB20 300 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 VAX2Q9UIW0 290 aa8.62□□□□□ -1.03
CDCA3-201ENST00000229265 MXRA5Q9NR99 2828 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 SMCO3A2RU48 225 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 IGHV3-7P01780 117 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 IGKV1-16P04430 117 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 FGF7P21781 194 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 PAX6P26367 422 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 GPR6P46095 362 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 HOXA1P49639 335 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 FHITP49789 147 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 ETFRF1Q6IPR1 90 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 RPP25LQ8N5L8 163 aaKnown RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 OR10G9Q8NGN4 311 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 OR10G7Q8NGN6 311 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 CLDND2Q8NHS1 167 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 NANPQ8TBE9 248 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 HARBI1Q96MB7 349 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 RSG1Q9BU20 258 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 MRPL20Q9BYC9 149 aaKnown RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 MANBALQ9NQG1 85 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 DPM3Q9P2X0 92 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 PRELID1Q9Y255 219 aa8.61□□□□□ -1.03
CDCA3-201ENST00000229265 POLR3KQ9Y2Y1 108 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 LSM4Q9Y4Z0 139 aaKnown RBP8.61□□□□□ -1.03
CDCA3-201ENST00000229265 TRAV3A0A0B4J244 114 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 MEX3AA1L020 520 aaKnown RBP8.6□□□□□ -1.03
CDCA3-201ENST00000229265 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 RRHO14718 337 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 CRYGBP07316 175 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
CDCA3-201ENST00000229265 SAA1P0DJI8 122 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-201ENST00000229265 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 HTR1DP28221 377 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-201ENST00000229265 HABP2Q14520 560 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-201ENST00000229265 RHEBQ15382 184 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 GUCA2BQ16661 112 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 UTF1Q5T230 341 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 MINOS1Q5TGZ0 78 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 CCDC144NLQ6NUI1 221 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 SLC35E3Q7Z769 313 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 VKORC1L1Q8N0U8 176 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 OR1L6Q8NGR2 347 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 RNF2Q99496 336 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 MINOS1-NBL1R4GNA1 71 aa8.6□□□□□ -1.03
CDCA3-201ENST00000229265 TANC2Q9HCD6 1990 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 A0A087WWC5 75 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 IGHV1-3A0A0C4DH29 117 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 A0A1W2PPV4 95 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 TMEM250H0YL14 139 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
CDCA3-201ENST00000229265 NDUFS8O00217 210 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 CORTO00230 105 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 AGPAT2O15120 278 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 ENSAO43768 121 aaKnown RBP8.59□□□□□ -1.03
CDCA3-201ENST00000229265 MT-CO2P00403 227 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 CA2P00918 260 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 IGLV2-23P01705 113 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 ADCYAP1P18509 176 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 CCL20P78556 96 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 AKR1C1Q04828 323 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
CDCA3-201ENST00000229265 SLC35E1Q96K37 410 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 SMCO4Q9NRQ5 59 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 TMEM242Q9NWH2 141 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 FAM96BQ9Y3D0 163 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 ARL2-SNX15V9GYD0 113 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 HIVEP2P31629 2446 aa8.59□□□□□ -1.03
CDCA3-201ENST00000229265 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 MAP1LC3B2A6NCE7 125 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 CXorf65A6NEN9 183 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 VWC2LB2RUY7 222 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 SNRNP70P08621 437 aaKnown RBP8.58□□□□□ -1.04
CDCA3-201ENST00000229265 SELENOTP62341 195 aa8.58□□□□□ -1.04
CDCA3-201ENST00000229265 CD69Q07108 199 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms