RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 KIR2DS1Q14954 304 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 PLGLAQ15195 96 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 LDLRAD2Q5SZI1 272 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 LHFPL1Q86WI0 220 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 GAPTQ8N292 157 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 COQ8AQ8NI60 647 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 PCNPQ8WW12 178 aaKnown RBP4.49□□□□□ -1.69
AFP-201ENST00000226359 RTN4IP1Q8WWV3 396 aaPredicted RBP4.49□□□□□ -1.69
AFP-201ENST00000226359 COMMD9Q9P000 198 aa4.49□□□□□ -1.69
AFP-201ENST00000226359 IGKV1D-8A0A087WSZ0 117 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 TRBV6-6A0A0A6YYG2 114 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 IGHV3-72A0A0B4J1Y9 119 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR5H14A6NHG9 310 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 RAB29O14966 203 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 YPEL1O60688 119 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR2A4O95047 310 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SFT2D2O95562 160 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 CTSDP07339 412 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 RCC1P18754 421 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 VDAC1P21796 283 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 PPP1CCP36873 323 aaKnown RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 ZNF137PP52743 207 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 KRTAP10-3P60369 221 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SNRPEP62304 92 aaKnown RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 FGL1Q08830 312 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 GAMTQ14353 236 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MMDQ15546 238 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 HMGN3Q15651 99 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 LGALSLQ3ZCW2 172 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 TMEM128Q5BJH2 165 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 GSG1LQ6UXU4 331 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SGPP2Q8IWX5 399 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 C5orf56Q8N8D9 126 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR11H4Q8NGC9 324 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MITD1Q8WV92 249 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MRGPRFQ96AM1 343 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 LINC00052Q96N35 136 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 YPEL2Q96QA6 119 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 TXN2Q99757 166 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MLST8Q9BVC4 326 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 C5orf66Q9H5L9 145 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SDHAF2Q9NX18 166 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 RBM7Q9Y580 266 aaKnown RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 A0A0B4J2A0 478 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 C13orf42A0A1B0GVH6 325 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MFSD2BA6NFX1 497 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 TRDCB7Z8K6 153 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 L7N2F9 121 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 MPC2O95563 127 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 DUS4LO95620 317 aaKnown RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 CTXN2P0C2S0 81 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 FCGR2CP31995 323 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 FXYD4P59646 89 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 DEFA6Q01524 100 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 DHODHQ02127 395 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SRSF7Q16629 238 aaKnown RBP eCLIP4.48□□□□□ -1.69
AFP-201ENST00000226359 MORN2Q502X0 79 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 AADACL3Q5VUY0 350 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 GGNBP1Q5YKI7 109 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 CCDC71LQ8N9Z2 235 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR4A4PQ8NGN8 299 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 OR5M8Q8NGP6 311 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 RTBDNQ9BSG5 229 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 Q9N2K0 584 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
AFP-201ENST00000226359 ZFP57Q9NU63 452 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 SHPKQ9UHJ6 478 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 KCNIP3Q9Y2W7 256 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 PRELID3BQ9Y3B1 194 aa4.48□□□□□ -1.69
AFP-201ENST00000226359 FXYD6-FXYD2A0A087WZ82 144 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 H7C2Y5 167 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 CCSO14618 274 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 ITGB1BP1O14713 200 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 SLC31A2O15432 143 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 NAPSAO96009 420 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 CFDP00746 253 aaPredicted RBP4.47□□□□□ -1.69
AFP-201ENST00000226359 NHLRC4P0CG21 123 aaPredicted RBP4.47□□□□□ -1.69
AFP-201ENST00000226359 AREGP15514 252 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 NFYAP23511 347 aaPredicted RBP4.47□□□□□ -1.69
AFP-201ENST00000226359 H2BFSP57053 126 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 S100A12P80511 92 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 CYCSP99999 105 aaKnown RBP4.47□□□□□ -1.69
AFP-201ENST00000226359 FLI1Q01543 452 aaPredicted RBP4.47□□□□□ -1.69
AFP-201ENST00000226359 EBI3Q14213 229 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 GNMTQ14749 295 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 CT45A1Q5HYN5 189 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 DHRS11Q6UWP2 260 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 Q6ZS49 121 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 ZNF439Q8NDP4 499 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 OR10J5Q8NHC4 309 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 CT45A3Q8NHU0 189 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 TMEM230Q96A57 120 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
AFP-201ENST00000226359 RITA1Q96K30 269 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms