RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
SEC61B-201ENST00000223641 STPG2Q8N412 459 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 ENY2Q9NPA8 101 aa11.02□□□□□ -0.65
SEC61B-201ENST00000223641 HEYLQ9NQ87 328 aaPredicted RBP11.02□□□□□ -0.65
SEC61B-201ENST00000223641 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 FBXO24O75426 580 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 APELAP0DMC3 54 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
SEC61B-201ENST00000223641 PVALBP20472 110 aaPredicted RBP11.01□□□□□ -0.65
SEC61B-201ENST00000223641 HTR2BP41595 481 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM65Q6PI78 240 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 OR2T6Q8NHC8 308 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
SEC61B-201ENST00000223641 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 NOL4LQ96MY1 436 aaPredicted RBP11.01□□□□□ -0.65
SEC61B-201ENST00000223641 P2RX4Q99571 388 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 WNT10AQ9GZT5 417 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 PSENENQ9NZ42 101 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 MBD2Q9UBB5 411 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
SEC61B-201ENST00000223641 C15orf62A8K5M9 175 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 SMLR1H3BR10 107 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 SOX15O60248 233 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 C1QBP02746 253 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 P2RY1P47900 373 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 RPL23AP62750 156 aaKnown RBP11□□□□□ -0.65
SEC61B-201ENST00000223641 ECSCRQ19T08 205 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 OR1P1Q8NH06 330 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 LINC01006Q8NI28 216 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 THAP6Q8TBB0 222 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
SEC61B-201ENST00000223641 TAF15Q92804 592 aaKnown RBP eCLIP11□□□□□ -0.65
SEC61B-201ENST00000223641 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 LYRM2Q9NU23 88 aaPredicted RBP11□□□□□ -0.65
SEC61B-201ENST00000223641 DMRT1Q9Y5R6 373 aa11□□□□□ -0.65
SEC61B-201ENST00000223641 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
SEC61B-201ENST00000223641 PMS2P5A8MQ11 134 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 L7N2F9 121 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 IGHG4P01861 327 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 REG1AP05451 166 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 HKR1P10072 659 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 NPY1RP25929 384 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 SNCAP37840 140 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 MFAP2P55001 183 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 VAMP2P63027 116 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 SRSF2Q01130 221 aaKnown RBP10.99□□□□□ -0.65
SEC61B-201ENST00000223641 SPANXN5Q5MJ07 72 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 OR5T1Q8NG75 326 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 OR1L6Q8NGR2 347 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 OR4C12Q96R67 309 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 GON7Q9BXV9 100 aa10.99□□□□□ -0.65
SEC61B-201ENST00000223641 IGLV11-55A0A075B6I3 123 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 TRBV9A0A0B4J1U6 114 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 HMSDA8MTL9 139 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 H3BP45 60 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 H3BUA1 57 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 PFDN1O60925 122 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 IFNA10P01566 189 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.655e-9■■■■■ 36.4
SEC61B-201ENST00000223641 RPP30P78346 268 aaKnown RBP10.98□□□□□ -0.65
SEC61B-201ENST00000223641 C19orf35Q6ZS72 473 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 NOXA1Q86UR1 476 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM252Q8N6L7 170 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 TNFSF18Q9UNG2 199 aa10.98□□□□□ -0.65
SEC61B-201ENST00000223641 STRAPQ9Y3F4 350 aaKnown RBP10.98□□□□□ -0.65
SEC61B-201ENST00000223641 C2CD3Q4AC94 2353 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 ARSJQ5FYB0 599 aaPredicted RBP10.97□□□□□ -0.65
SEC61B-201ENST00000223641 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 RNF152Q8N8N0 203 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 OR4F5Q8NH21 305 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 DCUN1D4Q92564 292 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
SEC61B-201ENST00000223641 IGSF23A1L1A6 192 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 HIST1H1BP16401 226 aaKnown RBP10.96□□□□□ -0.65
SEC61B-201ENST00000223641 PSMB8P28062 276 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 CAV2P51636 162 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 RAB11AP62491 216 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 HAPLN4Q86UW8 402 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 RNASEH2CQ8TDP1 164 aaKnown RBP10.96□□□□□ -0.65
SEC61B-201ENST00000223641 HYLS1Q96M11 299 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 SLC25A31Q9H0C2 315 aa10.96□□□□□ -0.65
SEC61B-201ENST00000223641 FXYD6-FXYD2A0A087WZ82 144 aa10.95□□□□□ -0.66
SEC61B-201ENST00000223641 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
SEC61B-201ENST00000223641 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
SEC61B-201ENST00000223641 PSMB11A5LHX3 300 aa10.95□□□□□ -0.66
SEC61B-201ENST00000223641 CORTO00230 105 aa10.95□□□□□ -0.66
SEC61B-201ENST00000223641 SCAF4O95104 1147 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms