RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 HOXA3O43365 443 aaPredicted RBP8.86□□□□□ -0.99
TRPS1-201ENST00000220888 EGR1P18146 543 aa8.86□□□□□ -0.99
TRPS1-201ENST00000220888 ZFP36L1Q07352 338 aaKnown RBP8.86□□□□□ -0.99
TRPS1-201ENST00000220888 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
TRPS1-201ENST00000220888 ST6GALNAC3Q8NDV1 305 aa8.86□□□□□ -0.99
TRPS1-201ENST00000220888 BEND2Q8NDZ0 799 aa8.86□□□□□ -0.99
TRPS1-201ENST00000220888 CACNA1BQ00975 2339 aa8.86□□□□□ -0.99
TRPS1-201ENST00000220888 TRAV20A0A0B4J274 112 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 RPL35AP18077 110 aaKnown RBP8.85□□□□□ -0.99
TRPS1-201ENST00000220888 IFI27P40305 119 aaPredicted RBP8.85□□□□□ -0.99
TRPS1-201ENST00000220888 FAM131CQ96AQ9 280 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ASCL2Q99929 193 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 VCX2Q9H322 139 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 MCM3APO60318 1980 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 NUP214P35658 2090 aaPredicted RBP8.85□□□□□ -0.99
TRPS1-201ENST00000220888 TRAV8-6A0A0B4J262 113 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 TRAV21A0A0B4J279 112 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 CD5P06127 495 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ASPHD2Q6ICH7 369 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 LINC01356Q8N9X3 169 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 NEUROG3Q9Y4Z2 214 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 RREB1Q92766 1687 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 E9PQ18 207 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 C1QL1O75973 258 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 IGFBP2P18065 325 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 AGAP20933 346 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ZNF414Q96IQ9 312 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 PLSCR2Q9NRY7 297 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 EREGO14944 169 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ZNF79Q15937 498 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 SLC25A34Q6PIV7 304 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 C18orf15Q96N68 181 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 WFIKKN1Q96NZ8 548 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
TRPS1-201ENST00000220888 C17orf98A8MV24 154 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 HLA-DQB1P01920 261 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TDGF1P3P51864 188 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 FMC1Q96HJ9 113 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TMEM187Q14656 261 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 SPATA45Q537H7 98 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TMEM136Q6ZRR5 245 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 KLHL30-AS1Q8NEE0 82 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 C1QTNF4Q9BXJ3 329 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 H3BUX3 64 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TSPAN13O95857 204 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 EGR4Q05215 589 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 BMPERQ8N8U9 685 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 IGHV1-18A0A0C4DH31 117 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 FABP5P3A8MUU1 101 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TCF23Q7RTU1 214 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 VMO1Q7Z5L0 202 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 SFRP2Q96HF1 295 aa8.84□□□□□ -0.99
TRPS1-201ENST00000220888 TMEM14DPA8MWL7 114 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 KIAA1644Q3SXP7 199 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 FBLN7Q53RD9 439 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 BIVMQ86UB2 503 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 TMEM219Q86XT9 240 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 TMEM86BQ8N661 226 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 RNF125Q96EQ8 232 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 SPRR3Q9UBC9 169 aa8.84□□□□□ -1
TRPS1-201ENST00000220888 CNOT1A5YKK6 2376 aaKnown RBP8.83□□□□□ -1
TRPS1-201ENST00000220888 SAA2-SAA4A0A096LPE2 208 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 A0A1B0GUT8 65 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 TMEM50AO95807 157 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 SAA2P0DJI9 122 aaPredicted RBP8.83□□□□□ -1
TRPS1-201ENST00000220888 C2orf68Q2NKX9 166 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 ZNF324BQ6AW86 544 aaPredicted RBP8.83□□□□□ -1
TRPS1-201ENST00000220888 Q6AWC8 147 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 TNFRSF14Q92956 283 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 IFT22Q9H7X7 185 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 CACNA1EQ15878 2313 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 OVOL1O14753 267 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 LCNL1Q6ZST4 164 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 Q9H3A6 140 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 PLA2G10O15496 165 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 CEACAM8P31997 349 aaPredicted RBP8.83□□□□□ -1
TRPS1-201ENST00000220888 CKS1BP61024 79 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 TEX38Q6PEX7 206 aa8.83□□□□□ -1
TRPS1-201ENST00000220888 A0A0G2JK05 382 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 UPK2O00526 184 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 IGHV1-46P01743 117 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 PLP1P60201 277 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 VWCEQ96DN2 955 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 AICDAQ9GZX7 198 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 TDRD6O60522 2096 aaKnown RBP8.82□□□□□ -1
TRPS1-201ENST00000220888 IGLV3-12A0A075B6K2 115 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 Q5PR19 223 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 C5orf66Q9H5L9 145 aa8.82□□□□□ -1
TRPS1-201ENST00000220888 QSER1Q2KHR3 1735 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms