RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 REG1BP48304 166 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 PSG7Q13046 419 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 COX19Q49B96 90 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 B4GALT7Q9UBV7 327 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 PRRC2CQ9Y520 2896 aaKnown RBP11.32□□□□□ -0.6
GABPB1-201ENST00000220429 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF816-ZNF321PA0A0X1KG74 233 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 A6NDN8 102 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 IGFBP2P18065 325 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 DPF1Q92782 380 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 IL36GQ9NZH8 169 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 TTC28Q96AY4 2481 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 APOA2P02652 100 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
GABPB1-201ENST00000220429 HES3Q5TGS1 186 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 BORCS8Q96FH0 119 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 H0Y8G0 127 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 IAPPP10997 89 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 RNPS1Q15287 305 aaKnown RBP11.31□□□□□ -0.6
GABPB1-201ENST00000220429 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
GABPB1-201ENST00000220429 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 GPHA2Q96T91 129 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
GABPB1-201ENST00000220429 TNRC6AQ8NDV7 1962 aaKnown RBP11.31□□□□□ -0.6
GABPB1-201ENST00000220429 ASPMQ8IZT6 3477 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 CNIH1O95406 144 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 FOXG1P55316 489 aaPredicted RBP11.3□□□□□ -0.6
GABPB1-201ENST00000220429 CX3CL1P78423 397 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 OR8B8Q15620 311 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 HLA-DQA1P01909 254 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 COX5AP20674 150 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
GABPB1-201ENST00000220429 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 C1QTNF5Q9BXJ0 243 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 SERTAD4Q9NUC0 356 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
GABPB1-201ENST00000220429 A0A096LPE4 126 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 A0A1W2PPZ6 126 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-201ENST00000220429 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-201ENST00000220429 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 K7EN84 100 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 ISLRO14498 428 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 SYNGR2O43760 224 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 TRIP6Q15654 476 aaKnown RBP11.29□□□□□ -0.6
GABPB1-201ENST00000220429 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 NEU4Q8WWR8 484 aaPredicted RBP11.29□□□□□ -0.6
GABPB1-201ENST00000220429 PIGCQ92535 297 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 RNF183Q96D59 192 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 APCSP02743 223 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 PLGLB1Q02325 96 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 SLC38A11Q08AI6 406 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 C3AR1Q16581 482 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 PIGYQ3MUY2 71 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 BPIFA4PQ86YQ2 179 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF503-AS2A6NEH8 195 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 AMY1AP04745 511 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 MEOX1P50221 254 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 ATP1A1-AS1Q5TC04 95 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 V9GYV3 84 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 SP1P08047 785 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 FABP2P12104 132 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 OR5D13Q8NGL4 314 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 RDH5Q92781 318 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 GALMQ96C23 342 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 MS4A6AQ9H2W1 248 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
GABPB1-201ENST00000220429 SIVA1O15304 175 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 DEFA4P12838 97 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 SLC35B1P78383 322 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 GAGE5Q13069 117 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 GAGE6Q13070 117 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
GABPB1-201ENST00000220429 MED12LQ86YW9 2145 aa11.27□□□□□ -0.61
GABPB1-201ENST00000220429 GAPTQ8N292 157 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms