RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OR1L8Q8NGR8 309 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 INTS1Q8N201 2190 aaKnown RBP10.87□□□□□ -0.67
SRP54-201ENST00000216774 HEATR1Q9H583 2144 aaKnown RBP10.87□□□□□ -0.67
SRP54-201ENST00000216774 TEX50A0A1B0GTY4 177 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 MT-ND6P03923 174 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 GNG10P50151 68 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 COX19Q49B96 90 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 DUX4L9Q6RFH8 374 aaPredicted RBP10.87□□□□□ -0.67
SRP54-201ENST00000216774 ZNF788Q6ZQV5 615 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 SLC35D1Q9NTN3 355 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 PCNX2A6NKB5 2137 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 EREGO14944 169 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 SERF1AO75920 110 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 IGHV1-46P01743 117 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 TNFSF4P23510 183 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 CRYBB3P26998 211 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 IER3P46695 156 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 NUTF2P61970 127 aaKnown RBP10.86□□□□□ -0.67
SRP54-201ENST00000216774 TIGITQ495A1 244 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 KRTCAP3Q53RY4 240 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 WDR73Q6P4I2 378 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 Q6ZWC4 215 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 DSCAML1Q8TD84 2053 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 A0A1W2PRE2 83 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
SRP54-201ENST00000216774 SNURFLB1AK76 121 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 CX3CL1P78423 397 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 OR5I1Q13606 314 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 DEFB109BQ30KR1 87 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 ZADH2Q8N4Q0 377 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 CCL13Q99616 98 aa10.86□□□□□ -0.67
SRP54-201ENST00000216774 hADV38S2A0JD32 116 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 ZNF705FA8MVS1 300 aaPredicted RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 M0R143 59 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 ISLRO14498 428 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 OR7C2O60412 319 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 FTH1P19P0C7X4 201 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 ZNF705DP0CH99 300 aaPredicted RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 ZNF705BP0CI00 300 aaPredicted RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 TEX36Q5VZQ5 186 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 BAGE3Q86Y29 109 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 BAGE2Q86Y30 109 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 OR8I2Q8N0Y5 310 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 OSR1Q8TAX0 266 aaPredicted RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 CACNG8Q8WXS5 425 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 MRPL32Q9BYC8 188 aaKnown RBP10.85□□□□□ -0.67
SRP54-201ENST00000216774 FAM215AQ9Y5M1 114 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 TANC2Q9HCD6 1990 aa10.85□□□□□ -0.67
SRP54-201ENST00000216774 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 MMP23AO75900 390 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 SAA1P0DJI8 122 aaPredicted RBP10.84□□□□□ -0.67
SRP54-201ENST00000216774 RNASE2P10153 161 aaKnown RBP10.84□□□□□ -0.67
SRP54-201ENST00000216774 COL8A2P25067 703 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 CD69Q07108 199 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 TPTE2P1Q5T6R2 138 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 MOB3BQ86TA1 216 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 FAM216BQ8N7L0 139 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 DEFB108BQ8NET1 73 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 OR5AU1Q8NGC0 362 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 FAM122AQ96E09 287 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 RNF2Q99496 336 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 C20orf144Q9BQM9 153 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 SLC25A33Q9BSK2 321 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 SNHG12Q9BXW3 62 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 LINC00312Q9Y6C7 94 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 DSCAMO60469 2012 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 INS-IGF2F8WCM5 200 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 RAB4AP20338 218 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 PPOXP50336 477 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 ST6GALNAC3Q8NDV1 305 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 CBLN4Q9NTU7 201 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 BDP1A6H8Y1 2624 aa10.84□□□□□ -0.67
SRP54-201ENST00000216774 IRF2P14316 349 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 C1orf185Q5T7R7 199 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 TOMM20LQ6UXN7 152 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 DOLPP1Q86YN1 238 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 IGF2BP2-AS1Q96M15 143 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 NEU1Q99519 415 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 GAL3ST2Q9H3Q3 398 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 LOC400499M0QZD8 3231 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 DLL1O00548 723 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 TCAPO15273 167 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 APOA2P02652 100 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 OR10J3Q5JRS4 329 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 IGF2-ASQ6U949 168 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 IGFL3Q6UXB1 125 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
SRP54-201ENST00000216774 ZNF714Q96N38 554 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms