RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 OR8U8P0C7N1 319 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 HNF1AP20823 631 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 RAB11AP62491 216 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 IFITM2Q01629 132 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 OR8G2PQ6IF36 304 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 OR10P1Q8NGE3 313 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 SMR3AQ99954 134 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
SNRPD3-201ENST00000215829 M0QZK8 103 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 AMY1AP04745 511 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 AREGP15514 252 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 CLINT1Q14677 625 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
SNRPD3-201ENST00000215829 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 BTBD17A6NE02 478 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 JTBO76095 146 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 LY6G6DO95868 133 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 IFNA4P05014 189 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 SUB1P53999 127 aaKnown RBP eCLIP12.62□□□□□ -0.393e-21■■■■■ 35.8
SNRPD3-201ENST00000215829 NDPQ00604 133 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 PINX1Q96BK5 328 aaKnown RBP12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 HSPB9Q9BQS6 159 aa12.62□□□□□ -0.39
SNRPD3-201ENST00000215829 DFFBO76075 338 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 REG1AP05451 166 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 APELAP0DMC3 54 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 CD99P14209 185 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 FOSL1P15407 271 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 SLC38A11Q08AI6 406 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 STOML3Q8TAV4 291 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ABHD5Q8WTS1 349 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 P2RX4Q99571 388 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ATP5SQ99766 215 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 FAM103A1Q9BTL3 118 aaKnown RBP12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 MXRA5Q9NR99 2828 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 PRSS46E5RG02 174 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 EGR2P11161 476 aaPredicted RBP12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 UBA52P62987 128 aaKnown RBP12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ZNF266Q14584 549 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ATP6V1FQ16864 119 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 LILRB2Q8N423 598 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 ST8SIA2Q92186 375 aa12.61□□□□□ -0.39
SNRPD3-201ENST00000215829 SH2D7A6NKC9 451 aaPredicted RBP12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 CFDP00746 253 aaPredicted RBP12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 EIF5AP63241 154 aaKnown RBP12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 VPREB3Q9UKI3 123 aa12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
SNRPD3-201ENST00000215829 CTRB1P17538 263 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 SGMS2Q8NHU3 365 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 GGACTQ9BVM4 153 aa12.59□□□□□ -0.39
SNRPD3-201ENST00000215829 CRYGCP07315 174 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 ASPHD1Q5U4P2 390 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 ARV1Q9H2C2 271 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 PARP11Q9NR21 331 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 TNFRSF19Q9NS68 423 aa12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.39
SNRPD3-201ENST00000215829 LINC01548A6NM66 108 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 BLCAPP62952 87 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 TTC9CQ8N5M4 171 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 LFNGQ8NES3 379 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 RNASEH2CQ8TDP1 164 aaKnown RBP12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 TMEM147Q9BVK8 224 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 WNT10AQ9GZT5 417 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 UQCC1Q9NVA1 299 aa12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 SETXQ7Z333 2677 aaKnown RBP12.58□□□□□ -0.4
SNRPD3-201ENST00000215829 NPIPB5A8MRT5 1133 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 RGS13O14921 159 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 IFNA5P01569 189 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 MFAP2P55001 183 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 DLK1P80370 383 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 SCGB2A2Q13296 93 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 GINS3Q9BRX5 216 aa12.57□□□□□ -0.4
SNRPD3-201ENST00000215829 FBXO24O75426 580 aa12.56□□□□□ -0.4
SNRPD3-201ENST00000215829 IFNA7P01567 189 aa12.56□□□□□ -0.4
SNRPD3-201ENST00000215829 IGHG2P01859 326 aa12.56□□□□□ -0.4
SNRPD3-201ENST00000215829 EXOSC2Q13868 293 aaKnown RBP12.56□□□□□ -0.4
SNRPD3-201ENST00000215829 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms