RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 HAGHQ16775 308 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CLEC12BQ2HXU8 276 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 MRGPRG-AS1Q2M3A8 158 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SCGB1C1Q8TD33 95 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 COMMD5Q9GZQ3 224 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RPRMQ9NS64 109 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RRHO14718 337 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 UBE2E1P51965 193 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PINX1Q96BK5 328 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PLEKHA3Q9HB20 300 aa15.8■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ZNF98A6NK75 572 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 E7EUB6 86 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 VENTXO95231 258 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CRYBA1P05813 215 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RPP30P78346 268 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 MINOS1Q5TGZ0 78 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 DYNAPQ8N1N2 210 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 WDR61Q9GZS3 305 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 MINOS1-NBL1R4GNA1 71 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR8U8P0C7N1 319 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 LGALS4P56470 323 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PAX8Q06710 450 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ICAM4Q14773 271 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SLC24A4Q8NFF2 622 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PSMG3Q9BT73 122 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ENY2Q9NPA8 101 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 NDUFA4L2Q9NRX3 87 aa15.79■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TRAV1-1A0A0B4J248 108 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 UBE2L5PA0A1B0GUS4 154 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 M0R036 132 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CRYGBP07316 175 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SRP19P09132 144 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CD1BP29016 333 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PSG5Q15238 335 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ZNF726P1Q15940 193 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TEX45Q8NA69 505 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PARD6GQ9BYG4 376 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 MLXQ9UH92 298 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 FASNP49327 2511 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CCDC168Q8NDH2 2452 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SCAF4O95104 1147 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SOHLH1Q5JUK2 328 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 C10orf55Q5SWW7 151 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR10W1Q8NGF6 305 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 OR1L8Q8NGR8 309 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 PSMG3-AS1Q96PY0 264 aa15.78■□□□□ 0.12
TNFRSF1A-201ENST00000162749 HBE1P02100 147 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 FBP1P09467 338 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SLC25A16P16260 332 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ATP6V1FQ16864 119 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ZNF506Q5JVG8 444 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 CCDC144NLQ6NUI1 221 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SSX7Q7RTT5 188 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 RNF5Q99942 180 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 ZMAT5Q9UDW3 170 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 SIGLEC9Q9Y336 463 aa15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 TBL2Q9Y4P3 447 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-201ENST00000162749 UNC79Q9P2D8 2635 aa15.77■□□□□ 0.11
TNFRSF1A-201ENST00000162749 ZNF469Q96JG9 3925 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CGB1A6NKQ9 187 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 OOSP1A8MZH6 123 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 PRSS46E5RG02 174 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 NPY1RP25929 384 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TMEM147Q9BVK8 224 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 IGKV1D-33P01593 117 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 IGKV1-33P01594 117 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CD24P25063 80 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 VWC2Q2TAL6 325 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 C15orf54Q8N8G6 183 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TAF15Q92804 592 aaKnown RBP eCLIP15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 AJUBAQ96IF1 538 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CR1P17927 2039 aa15.76■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CA2P00918 260 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 SAA4P35542 130 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 AKR1D1P51857 326 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 SERF2P84101 59 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 PRSS8Q16651 343 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 FBLN7Q53RD9 439 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 PPP1R27Q86WC6 154 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MMD2Q8IY49 270 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MBD3L1Q8WWY6 194 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 METTL1Q9UBP6 276 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 CENPVL3A0A0U1RRI6 287 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 HSPB1P04792 205 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 IFNA4P05014 189 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MSMBP08118 114 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RPL35P42766 123 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RAB11AP62491 216 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 HIST1H2BAQ96A08 127 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 ISOC2Q96AB3 205 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TUBA4BQ9H853 241 aa15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 PUS1Q9Y606 427 aaKnown RBP eCLIP15.75■□□□□ 0.11
TNFRSF1A-201ENST00000162749 TEX15Q9BXT5 2789 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 A0A096LNT2 108 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 MOSP00540 346 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 HNF4GQ14541 408 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 BSXQ3C1V8 233 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 RCC1LQ96I51 464 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-201ENST00000162749 FBXL15Q9H469 300 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms