RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CCL17Q92583 94 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 MS4A10Q96PG2 267 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 DIRC2Q96SL1 478 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 F2Z2F3 143 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 PRB4P10163 310 aaPredicted RBP6.78□□□□□ -1.32
CDC27-201ENST00000066544 UHRF2Q96PU4 802 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 CBLN4Q9NTU7 201 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 FKBP11Q9NYL4 201 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 CA1P00915 261 aaPredicted RBP6.78□□□□□ -1.32
CDC27-201ENST00000066544 DIAPH2-AS1Q14236 149 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 OR2T6Q8NHC8 308 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 LSM4Q9Y4Z0 139 aaKnown RBP6.78□□□□□ -1.32
CDC27-201ENST00000066544 PTPRQQ9UMZ3 2332 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 IGHV3-21A0A0B4J1V1 117 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 FCN1O00602 326 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 KLK10O43240 276 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 REG1AP05451 166 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
CDC27-201ENST00000066544 RAB1CQ92928 201 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 LINC00479Q96M42 142 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 HARBI1Q96MB7 349 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
CDC27-201ENST00000066544 MRPL20Q9BYC9 149 aaKnown RBP6.78□□□□□ -1.32
CDC27-201ENST00000066544 MBD3L4A6NDZ8 208 aaPredicted RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 MBD3L3A6NE82 208 aaPredicted RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 MBD3L5A6NJ08 208 aaPredicted RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 CT45A6P0DMU7 189 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 CT45A5P0DMU8 189 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 CT45A7P0DMV0 189 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 CGB3P0DN86 165 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 CGB7P0DN87 165 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 RPL15P61313 204 aaKnown RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 KRTCAP3Q53RY4 240 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 CENPWQ5EE01 88 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 MRPL54Q6P161 138 aaKnown RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 BAGE3Q86Y29 109 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 BAGE2Q86Y30 109 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 MBD3L2Q8NHZ7 208 aaPredicted RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 ATG101Q9BSB4 218 aa6.77□□□□□ -1.32
CDC27-201ENST00000066544 FAM103A1Q9BTL3 118 aaKnown RBP6.77□□□□□ -1.32
CDC27-201ENST00000066544 SNURFLB1AK76 121 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 SAA1P0DJI8 122 aaPredicted RBP6.77□□□□□ -1.33
CDC27-201ENST00000066544 SSX2Q16385 188 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 OR52E5Q8NH55 327 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 COMMD5Q9GZQ3 224 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 HELTA6NFD8 242 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 LCN2P80188 198 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 MORN5Q5VZ52 161 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 IGFL2Q6UWQ7 119 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 OR1L6Q8NGR2 347 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 SSBP3Q9BWW4 388 aaPredicted RBP6.77□□□□□ -1.33
CDC27-201ENST00000066544 MRPL18Q9H0U6 180 aaKnown RBP6.77□□□□□ -1.33
CDC27-201ENST00000066544 TMEM14BQ9NUH8 114 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 RPH3ALQ9UNE2 315 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 DSCAML1Q8TD84 2053 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 E7EUB6 86 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 CD40P25942 277 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 GNG4P50150 75 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 TOMM20LQ6UXN7 152 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 TMEM144Q7Z5S9 345 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 GBGT1Q8N5D6 347 aa6.77□□□□□ -1.33
CDC27-201ENST00000066544 LHBP01229 141 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TYMSP04818 313 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 LINC00869P0C866 280 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 CRISP2P16562 243 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TNFSF4P23510 183 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 RTL8BQ17RB0 113 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 C19orf35Q6ZS72 473 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 PIP4P1Q86T03 277 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 MMD2Q8IY49 270 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 ARHGAP32A7KAX9 2087 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TEX50A0A1B0GTY4 177 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 MT-CO2P00403 227 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 SSBP2P81877 361 aaPredicted RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 STUMQ69YW2 141 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 OR5R1Q8NH85 324 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TBX15Q96SF7 602 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TUBG2Q9NRH3 451 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 H3BTX0 84 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 EREGO14944 169 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 ENSAO43768 121 aaKnown RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 SERF1AO75920 110 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 KIR2DS2P43631 304 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 RPL29P47914 159 aaKnown RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 LGALS4P56470 323 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 C1orf185Q5T7R7 199 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 RPUSD1Q9UJJ7 312 aaKnown RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
CDC27-201ENST00000066544 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 A8MWP6 167 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 A8MXE2 369 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 UPK2O00526 184 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 PYYP10082 97 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 TDRG1Q3Y452 100 aa6.76□□□□□ -1.33
CDC27-201ENST00000066544 SLC25A10Q9UBX3 287 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms