RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 CFHR4Q92496 578 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 BBC3Q96PG8 261 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 BPESC1Q9GZL8 116 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 VAX2Q9UIW0 290 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 POLR3KQ9Y2Y1 108 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PXMP4Q9Y6I8 212 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 TIMM23O14925 209 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PRR20EP86478 221 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PRR20CP86479 221 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PRR20DP86480 221 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PRR20BP86481 221 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PRR20AP86496 221 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 C10orf55Q5SWW7 151 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 FAM122CQ6P4D5 195 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 IGLC7A0M8Q6 106 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 RNF224P0DH78 156 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 RPL27AP46776 148 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 CCDC144NLQ6NUI1 221 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 ZNF843Q8N446 348 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 SRSF8Q9BRL6 282 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 METTL1Q9UBP6 276 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
RTFDC1-201ENST00000023939 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 FOXH1O75593 365 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 ACTL6BO94805 426 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 CNTFRP26992 372 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 B2MP61769 119 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 KLRD1Q13241 179 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 GAMTQ14353 236 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 NPBQ8NG41 125 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 CCL19Q99731 98 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 SMG1Q96Q15 3661 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-201ENST00000023939 ZFP92A6NM28 416 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 NDUFS8O00217 210 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 PSMB3P49720 205 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 SLC16A13Q7RTY0 426 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 TMA7Q9Y2S6 64 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 IGSF10Q6WRI0 2623 aa11.46□□□□□ -0.57
RTFDC1-201ENST00000023939 NDUFA3O95167 84 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 MOSP00540 346 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 PRB1P04280 392 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 LINC00869P0C866 280 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 LCN2P80188 198 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 RHEBQ15382 184 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 TNXAQ16473 311 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 GCSAMLQ5JQS6 135 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 LHFPL4Q7Z7J7 247 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 SLC35E1Q96K37 410 aa11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.58
RTFDC1-201ENST00000023939 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 CRYGCP07315 174 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 UBE2E1P51965 193 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 EBI3Q14213 229 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 SSMEM1Q8WWF3 244 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 HILPDAQ9Y5L2 63 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 DOPEY1Q5JWR5 2465 aa11.45□□□□□ -0.58
RTFDC1-201ENST00000023939 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 TEX22C9J3V5 150 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 NBR2O15453 112 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 TSPAN9O75954 239 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 STAG3L2P0CL84 134 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 PAX6P26367 422 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 FAM90A2PQ658T7 463 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 C10orf105Q8TEF2 133 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 FBXL15Q9H469 300 aa11.44□□□□□ -0.58
RTFDC1-201ENST00000023939 C7orf77A4D0Y5 90 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 H3BQ15 152 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 CORTO00230 105 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TOX4O94842 621 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 SNRNP70P08621 437 aaKnown RBP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 FBP1P09467 338 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms