RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 GPX8Q8TED1 209 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 SLC25A46Q96AG3 418 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 TMEM56Q96MV1 263 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 CHRDL1Q9BU40 450 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 OR51B2Q9Y5P1 312 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
ERCC1-201ENST00000013807 RPA2P15927 270 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 BMI1P35226 326 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 G6PCP35575 357 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 APOC4P55056 127 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 UCP3P55916 312 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 SCPEP1Q9HB40 452 aa11.78□□□□□ -0.52
ERCC1-201ENST00000013807 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 HRH1P35367 487 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 SEC22AQ96IW7 307 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 TXN2Q99757 166 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 NSG2Q9Y328 171 aa11.77□□□□□ -0.53
ERCC1-201ENST00000013807 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
ERCC1-201ENST00000013807 APOA1P02647 267 aa11.76□□□□□ -0.53
ERCC1-201ENST00000013807 TSPAN14Q8NG11 270 aa11.76□□□□□ -0.53
ERCC1-201ENST00000013807 RNF183Q96D59 192 aa11.76□□□□□ -0.53
ERCC1-201ENST00000013807 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
ERCC1-201ENST00000013807 A0A087WXM4 84 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 I3L2K1 104 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 SPRY2O43597 315 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 GALNT14Q96FL9 552 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
ERCC1-201ENST00000013807 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 EIF4EP06730 217 aaKnown RBP11.74□□□□□ -0.53
ERCC1-201ENST00000013807 S100GP29377 79 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 CMC4P56277 68 aaPredicted RBP11.74□□□□□ -0.53
ERCC1-201ENST00000013807 PRCDQ00LT1 54 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 RELQ04864 619 aaPredicted RBP11.74□□□□□ -0.53
ERCC1-201ENST00000013807 LINC00476Q8WZB0 136 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 NXF2Q9GZY0 626 aaKnown RBP11.74□□□□□ -0.53
ERCC1-201ENST00000013807 VCX3AQ9NNX9 186 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
ERCC1-201ENST00000013807 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 CHEK1O14757 476 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 NUPL2O15504 423 aaKnown RBP11.73□□□□□ -0.53
ERCC1-201ENST00000013807 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
ERCC1-201ENST00000013807 MFAP4P55083 255 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
ERCC1-201ENST00000013807 TSPAN5P62079 268 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 LSM3P62310 102 aaKnown RBP11.73□□□□□ -0.53
ERCC1-201ENST00000013807 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 Q56UQ5 140 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 LYG2Q86SG7 212 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 STPG3Q8N7X2 389 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 C20orf24Q9BUV8 137 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 MAP6D1Q9H9H5 199 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
ERCC1-201ENST00000013807 TNFAIP8O95379 198 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 CD5P06127 495 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 RCVRNP35243 200 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 RND3P61587 244 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
ERCC1-201ENST00000013807 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 H2BFWTQ7Z2G1 175 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 UBAC2Q8NBM4 344 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 RNF2Q99496 336 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 RHPN1-AS1Q9BWJ2 59 aa11.72□□□□□ -0.53
ERCC1-201ENST00000013807 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 P0C879 139 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
ERCC1-201ENST00000013807 LHFPL1Q86WI0 220 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 OR4A16Q8NH70 328 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
ERCC1-201ENST00000013807 FUNDC2Q9BWH2 189 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 COMMD3Q9UBI1 195 aa11.71□□□□□ -0.53
ERCC1-201ENST00000013807 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
ERCC1-201ENST00000013807 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
ERCC1-201ENST00000013807 MT-CO2P00403 227 aa11.7□□□□□ -0.54
ERCC1-201ENST00000013807 ELK1P19419 428 aa11.7□□□□□ -0.54
ERCC1-201ENST00000013807 ERHP84090 104 aaKnown RBP11.7□□□□□ -0.54
ERCC1-201ENST00000013807 AGRNO00468 2067 aa11.7□□□□□ -0.54
ERCC1-201ENST00000013807 NCS1P62166 190 aa11.69□□□□□ -0.54
ERCC1-201ENST00000013807 TMEM217Q8N7C4 229 aa11.69□□□□□ -0.54
ERCC1-201ENST00000013807 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
ERCC1-201ENST00000013807 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
ERCC1-201ENST00000013807 MISP3Q96FF7 219 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms