RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 DhdhQ9DBB8 333 aa11.02□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cdhr4H3BJZ2 783 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm21863J3KMP8 111 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vmn1r121K7N6J4 314 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Evx1P23683 416 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 VhlP40338 181 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tnfsf10P50592 291 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 PmchP56942 165 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Mettl4Q3U034 471 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Clpsl2Q3UW21 102 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Npy4rQ61041 375 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr1204Q7TR10 309 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr720Q8VF37 316 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rab40cQ8VHQ4 281 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cisd2Q9CQB5 135 aaKnown RBP11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr926Q9EQ98 308 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gtf3c1Q8K284 2101 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm10638F6QEG2 257 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Pira2F8VQ94 680 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr224M9MMJ7 314 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Ifna6P07350 189 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cox5aP12787 146 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cdx1P18111 268 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 GrnP28798 589 aaKnown RBP11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Htr2bQ02152 479 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 PjvkQ0ZLH2 352 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Repin1Q5U4E2 545 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Foxg1Q60987 481 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr504Q7TRU7 318 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Efcab10Q9D581 132 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr159Q9QZ19 319 aa11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Arpc1bQ9WV32 372 aaKnown RBP11.01□□□□□ -0.65
Nup88-203ENSMUST00000108531 Igkv4-50A0A0B4J1J0 117 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Kcnk15B2RVL1 343 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Q3U595 105 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Trav8d-1Q5R1H8 112 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vgll4Q80V24 287 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 C030005K15RikQ8BQN9 115 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cnot4Q8BT14 575 aaKnown RBP11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr112Q8C0S2 320 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vrk3Q8K3G5 453 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Angptl6Q8R0Z6 457 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Dok5Q91ZM9 306 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Zfp958Q99LG7 467 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Mrpl27Q99N92 148 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Fam241aQ9CZL2 131 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr710Q9EP55 310 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tsc22d4Q9EQN3 387 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Lrrc29A0A1B0GQY9 621 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Samt1A2BED8 237 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm15140A2BEE3 237 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Amy2a1E9PV85 245 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr117L7N1Z1 317 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Fabp9O08716 132 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 AgrpP56473 131 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm5615Q3UW02 101 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vdac1Q60932 296 aaKnown RBP11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vstm2lQ6PDS0 220 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Slc46a1Q6PEM8 459 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr130Q8VFC1 317 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Mpped1Q91ZG2 326 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Dusp3Q9D7X3 185 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Pex14Q9R0A0 376 aa11□□□□□ -0.65
Nup88-203ENSMUST00000108531 Pwwp2bE9Q9M8 600 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Casp16-psI6L890 176 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 GzmbP04187 247 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 GferP56213 198 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tppp2Q0P5Y3 170 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cd55bQ61476 407 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Mettl21AQ9CQL0 218 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tmem208Q9CR96 173 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr945Q9EQB5 319 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 NagkQ9QZ08 343 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm45871A0A1B0GRI9 540 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vmn1r180B9EK86 305 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Vmn1r194J3JS27 296 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm5108J3QP01 101 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm10666K7N6B8 321 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Iglc3P01845 104 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Dvl1P51141 695 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Rab11aP62492 216 aaKnown RBP10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Prss46Q5M8S2 314 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 HykkQ5U5V2 376 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Cypt4Q6P925 153 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 EogtQ8BYW9 527 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr1444Q8VFX2 319 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Egln1Q91YE3 400 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 FrkQ922K9 512 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tmem128Q9CZB9 163 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Tmem88Q9D0N8 159 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 PifoQ9D9W1 207 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Zfp111Q9R164 701 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 Lhx2Q9Z0S2 406 aa10.99□□□□□ -0.65
Nup88-203ENSMUST00000108531 AsmtD3KU66 387 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Olfr902E9Q6Z7 309 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Gm6594J3QM43 95 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Atf6bO35451 699 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Nudt10P0C027 164 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Nudt11P0C028 164 aa10.98□□□□□ -0.65
Nup88-203ENSMUST00000108531 Il11P47873 199 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms