RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	RAB14	P61106	215 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	HERV-K104	P61576	105 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	RIG	Q13278	110 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	TIGIT	Q495A1	244 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	YIF1B	Q5BJH7	314 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	LDLRAD2	Q5SZI1	272 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	OR2W3	Q7Z3T1	314 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	TRPT1	Q86TN4	253 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	OSR2	Q8N2R0	312 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	OR10X1	Q8NGY0	326 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	OR52N1	Q8NH53	320 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	MRPS24	Q96EL2	167 aa	Known RBP	4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	DCUN1D5	Q9BTE7	237 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	VCX	Q9H320	206 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF286A	Q9HBT8	521 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	BABAM2	Q9NXR7	383 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	ST3GAL6	Q9Y274	331 aa		4.86	□□□□□ -1.63
CASC19-238	ENST00000641523	EFCAB10	A6NFE3	127 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	HSD17B6	O14756	317 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	PPP1R2P9	O14990	202 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	PIN1P1	O15428	100 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	CA11	O75493	328 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	MMP23A	O75900	390 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	LIMS3	P0CW19	117 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	LIMS4	P0CW20	117 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	CD28	P10747	220 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	GTF2F2	P13984	249 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	GNG10	P50151	68 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	RBM11	P57052	281 aa	Known RBP	4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	BLCAP	P62952	87 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	SLC35A2	P78381	396 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	TPBG	Q13641	420 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	C5orf64	Q2M2E5	130 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523		Q499Y3	187 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	ABCA11P	Q4W5N1	156 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	SMIM29	Q86T20	159 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	OR51D1	Q8NGF3	324 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	NEK7	Q8TDX7	302 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	TMEM80	Q96HE8	168 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	OR5M11	Q96RB7	305 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	OVOL2	Q9BRP0	275 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF649	Q9BS31	505 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	TOLLIP	Q9H0E2	274 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	TAS2R4	Q9NYW5	299 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	IDI2-AS1	Q9NZ38	188 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	ELF5	Q9UKW6	265 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	KCNIP3	Q9Y2W7	256 aa		4.85	□□□□□ -1.63
CASC19-238	ENST00000641523	TCRBV4S1A1T	A0A5B7	111 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	LY6L	H3BQJ8	138 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	CCRL2	O00421	344 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	ORC5	O43913	435 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	CGB3	P0DN86	165 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	CGB7	P0DN87	165 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	G0S2	P27469	103 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	GTF2A1	P52655	376 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	LINC01547	P58512	204 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	SLC35B1	P78383	322 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.84	□□□□□ -1.63	1e-6	■□□□□ 9.5
CASC19-238	ENST00000641523	HES1	Q14469	280 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	LAGE3	Q14657	143 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	C17orf58	Q2M2W7	97 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	PIGY	Q3MUY2	71 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	ADAMTSL5	Q6ZMM2	481 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	AHSA2	Q719I0	299 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	SUMF2	Q8NBJ7	301 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	WFDC9	Q8NEX5	89 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	OR1S2	Q8NGQ3	325 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	OR5B3	Q8NH48	314 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	MRGPRD	Q8TDS7	321 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	APH1B	Q8WW43	257 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	CYGB	Q8WWM9	190 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	GHSR	Q92847	366 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF184	Q99676	751 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	RSG1	Q9BU20	258 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	ING4	Q9UNL4	249 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	PSG11	Q9UQ72	335 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	RCL1	Q9Y2P8	373 aa	Known RBP	4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	TENM3	Q9P273	2699 aa		4.84	□□□□□ -1.63
CASC19-238	ENST00000641523	LOC105371267	A0A1B0GV96	52 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	PSMB11	A5LHX3	300 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	FAM172BP	A6NC97	362 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	MCRIP1	C9JLW8	97 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	AIP	O00170	330 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	SULT1C2	O00338	296 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	MYL12B	O14950	172 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	CDK2AP2	O75956	126 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	CDRT1	O95170	752 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	RAB3D	O95716	219 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	SERPINA2	P20848	420 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	SSTR5	P35346	364 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	RANBP1	P43487	201 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	TRIM16L	Q309B1	348 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	FAM106A	Q4KMX7	169 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	FFAR4	Q5NUL3	377 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	ATAD3C	Q5T2N8	411 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	OR2G6	Q5TZ20	316 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	ZNF497	Q6ZNH5	498 aa		4.83	□□□□□ -1.64
CASC19-238	ENST00000641523	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms