RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 A0A0B4J293 547 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 TEX50A0A1B0GTY4 177 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 FCN1O00602 326 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 SSSCA1O60232 199 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 TSPAN9O75954 239 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 IGHG2P01859 326 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-218ENST00000641491 BCAP31P51572 246 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 TNFRSF9Q07011 255 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 FCN2Q15485 313 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 LRRC37A5PQ49AS3 106 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 C10orf55Q5SWW7 151 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 Q6ZNX1 250 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 OR4X2Q8NGF9 303 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
PHGDH-218ENST00000641491 NMES1Q9C002 83 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 ZC4H2Q9NQZ6 224 aa10.26□□□□□ -0.77
PHGDH-218ENST00000641491 PSMB11A5LHX3 300 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 NDUFA7O95182 113 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 SIX6O95475 246 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 IFNA10P01566 189 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 APELAP0DMC3 54 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 OR13C7P0DN81 318 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 RAB11AP62491 216 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 RPL23AP62750 156 aaKnown RBP10.25□□□□□ -0.77
PHGDH-218ENST00000641491 FOXL1Q12952 345 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 Q6ZSV7 163 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 STPG2Q8N412 459 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 LFNGQ8NES3 379 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 THAP6Q8TBB0 222 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 OR10C1Q96KK4 312 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 ZNF436Q9C0F3 470 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-218ENST00000641491 MAGT1Q9H0U3 335 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 THYN1Q9P016 225 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 WSB1Q9Y6I7 421 aa10.25□□□□□ -0.77
PHGDH-218ENST00000641491 HAX1O00165 279 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 SYNGR2O43760 224 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 SCGB2A1O75556 95 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-218ENST00000641491 OR8U8P0C7N1 319 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 P0C879 139 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 IAPPP10997 89 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 RAB40CQ96S21 281 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 RBKSQ9H477 322 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 HSPB7Q9UBY9 170 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 CUBNO60494 3623 aa10.24□□□□□ -0.77
PHGDH-218ENST00000641491 HMX3A6NHT5 357 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 MPTX1A8MV57 137 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 SCAF4O95104 1147 aaKnown RBP10.23□□□□□ -0.77
PHGDH-218ENST00000641491 AMY1AP04745 511 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 IGF1P05019 195 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 HIST1H1BP16401 226 aaKnown RBP10.23□□□□□ -0.77
PHGDH-218ENST00000641491 HTR2BP41595 481 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 RAP2BP61225 183 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 CD83Q01151 205 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 AKIRIN2Q53H80 203 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-218ENST00000641491 TEX38Q6PEX7 206 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 Q6ZRM9 215 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 COMMD1Q8N668 190 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 OR4D5Q8NGN0 318 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 RCL1Q9Y2P8 373 aaKnown RBP10.23□□□□□ -0.77
PHGDH-218ENST00000641491 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
PHGDH-218ENST00000641491 CLPSL1A2RUU4 121 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 CORTO00230 105 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 CCNKO75909 580 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 IFNA4P05014 189 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 REG1AP05451 166 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 IL6RP08887 468 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-218ENST00000641491 HKR1P10072 659 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 PF4V1P10720 104 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 MYOD1P15172 320 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 PSMB6P28072 239 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 CAV2P51636 162 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 POLR2GP62487 172 aaKnown RBP eCLIP10.22□□□□□ -0.77
PHGDH-218ENST00000641491 NDPQ00604 133 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
PHGDH-218ENST00000641491 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 SLC25A24Q6NUK1 477 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 STX12Q86Y82 276 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 Q8N2B8 174 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 KLHDC1Q8N7A1 406 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 OR5T1Q8NG75 326 aa10.22□□□□□ -0.77
PHGDH-218ENST00000641491 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-218ENST00000641491 PPP1R1CQ8WVI7 109 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms