RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 RAB7AP51149 207 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 KLF3P57682 345 aaPredicted RBP12.45□□□□□ -0.42
PAX6-277ENST00000640735 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 C16orf82Q7Z2V1 217 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 TGIF2LYQ8IUE0 185 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 OR4A16Q8NH70 328 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 SNRNP40Q96DI7 357 aaKnown RBP12.45□□□□□ -0.42
PAX6-277ENST00000640735 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 ASCL2Q99929 193 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
PAX6-277ENST00000640735 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
PAX6-277ENST00000640735 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 LINC00587B1AMM8 73 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 HMGB3O15347 200 aaKnown RBP12.44□□□□□ -0.42
PAX6-277ENST00000640735 CDKN1AP38936 164 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 OPRK1P41145 380 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 ADIRFQ15847 76 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 LTC4SQ16873 150 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 SDSLQ96GA7 329 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 FAM215AQ9Y5M1 114 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 IGHV3OR15-7A0A075B7D8 119 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 A0A087WWL8 130 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 PAGE4O60829 102 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 CRYAAP02489 173 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 CRYGCP07315 174 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 ERVK-16P61578 105 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 HNF4GQ14541 408 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 OR10A7Q8NGE5 316 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 RPUSD4Q96CM3 377 aaKnown RBP12.44□□□□□ -0.42
PAX6-277ENST00000640735 S1PR3Q99500 378 aa12.44□□□□□ -0.42
PAX6-277ENST00000640735 TLN1Q9Y490 2541 aaKnown RBP12.43□□□□□ -0.42
PAX6-277ENST00000640735 FAM90A27PA6NNH2 459 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 M0R1B8 84 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 S100A2P29034 98 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 TIMP3P35625 211 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 OR51G1Q8NGK1 321 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 ITLN1Q8WWA0 313 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 MISP3Q96FF7 219 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 LINC00574Q9H8X3 128 aa12.43□□□□□ -0.42
PAX6-277ENST00000640735 TEX22C9J3V5 150 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 K7EQM0 130 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 SOD3P08294 240 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 NPPCP23582 126 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 PYY3Q5JQD4 70 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 TREML4Q6UXN2 200 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
PAX6-277ENST00000640735 OR4S2Q8NH73 311 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 RNF24Q9Y225 148 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 ATRXP46100 2492 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 KBTBD11-OT1A0A1B0GTJ5 212 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 H7BYZ3 331 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 RRHO14718 337 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 SLC31A2O15432 143 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 GYPAP02724 150 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 POU2AF1Q16633 256 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 CITED1Q99966 193 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 LSM4Q9Y4Z0 139 aaKnown RBP12.42□□□□□ -0.42
PAX6-277ENST00000640735 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
PAX6-277ENST00000640735 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 HELTA6NFD8 242 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 TMPRSS2O15393 492 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 PDE6DO43924 150 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 IFNA10P01566 189 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 PRB1P04280 392 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 THBS3P49746 956 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 STUMQ69YW2 141 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 OR4X1Q8NH49 305 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 ADTRPQ96IZ2 230 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 MGST2Q99735 147 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 KCNIP2Q9NS61 270 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 FOXA2Q9Y261 457 aaPredicted RBP12.41□□□□□ -0.42
PAX6-277ENST00000640735 TET2Q6N021 2002 aaPredicted RBP12.41□□□□□ -0.42
PAX6-277ENST00000640735 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 C11orf94C9JXX5 98 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 SPRY3O43610 288 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 GGCTO75223 188 aaKnown RBP12.41□□□□□ -0.42
PAX6-277ENST00000640735 HRASP01112 189 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
PAX6-277ENST00000640735 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
PAX6-277ENST00000640735 TDGF1P3P51864 188 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 EDDM3BP56851 147 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
PAX6-277ENST00000640735 SSX9Q7RTT3 188 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms