RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PF4V1P10720 104 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 ZNF383Q8NA42 475 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 OR4D5Q8NGN0 318 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 MRPL32Q9BYC8 188 aaKnown RBP14.7□□□□□ -0.06
SCARB2-223ENST00000640640 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-223ENST00000640640 H3BTX0 84 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 TIMP3P35625 211 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 ATP5J2P56134 94 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 FBXL15Q9H469 300 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 DENND4CQ5VZ89 1909 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 SAA2-SAA4A0A096LPE2 208 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 SAA2P0DJI9 122 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-223ENST00000640640 IGFBP2P18065 325 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 HOXA4Q00056 320 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-223ENST00000640640 HGFACQ04756 655 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 SPACA3Q8IXA5 215 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 TRAV30A0A087WSZ9 112 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 C19orf35Q6ZS72 473 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 EAF1Q96JC9 268 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-223ENST00000640640 SGK494Q96LW2 274 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 BMPR1BO00238 502 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 PRSS1P07477 247 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 SRSF6Q13247 344 aaKnown RBP14.69□□□□□ -0.06
SCARB2-223ENST00000640640 SRSF7Q16629 238 aaKnown RBP eCLIP14.69□□□□□ -0.06
SCARB2-223ENST00000640640 FGF16O43320 207 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 GTF3C1Q12789 2109 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 NPIPB11E5RHQ5 1161 aa14.69□□□□□ -0.06
SCARB2-223ENST00000640640 GPR61Q9BZJ8 451 aa14.68□□□□□ -0.06
SCARB2-223ENST00000640640 LILRA1O75019 489 aa14.68□□□□□ -0.06
SCARB2-223ENST00000640640 HLA-DQA1P01909 254 aa14.68□□□□□ -0.06
SCARB2-223ENST00000640640 CYP2G1PQ6ZSU1 146 aa14.68□□□□□ -0.06
SCARB2-223ENST00000640640 HSPB7Q9UBY9 170 aa14.68□□□□□ -0.06
SCARB2-223ENST00000640640 DUTP33316 252 aaKnown RBP14.68□□□□□ -0.06
SCARB2-223ENST00000640640 VENTXO95231 258 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 WFDC3Q8IUB2 231 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 RNASE6Q93091 150 aaKnown RBP14.67□□□□□ -0.06
SCARB2-223ENST00000640640 IGHV3-35A0A0C4DH35 117 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 E9PLN8 166 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 RBFOX2O43251 390 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCARB2-223ENST00000640640 CD55P08174 381 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 VN1R17PQ8TDU5 208 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 ZNF581Q9P0T4 197 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 FOXH1O75593 365 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 IGHV1-46P01743 117 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 NEU4Q8WWR8 484 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-223ENST00000640640 TMEM78Q5T7P6 136 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
SCARB2-223ENST00000640640 COX6B1P14854 86 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 RPL7P18124 248 aaKnown RBP14.66□□□□□ -0.06
SCARB2-223ENST00000640640 CD81P60033 236 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 RNFT1Q5M7Z0 435 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 LINC00305Q7Z4B0 112 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 METTL26Q96S19 204 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 PAM16Q9Y3D7 125 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 SH2D7A6NKC9 451 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-223ENST00000640640 IL4P05112 153 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 SFRP2Q96HF1 295 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 PIMREGQ9BSJ6 248 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 RAXQ9Y2V3 346 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 CGAP01215 116 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 TRGC1P0CF51 173 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 SAA1P0DJI8 122 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-223ENST00000640640 SELLP14151 372 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 CFPP27918 469 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 Q6ZN92 141 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 C5orf24Q7Z6I8 188 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 OR1P1Q8NH06 330 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 MAP1LC3CQ9BXW4 147 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 ZGRF1Q86YA3 2104 aa14.66□□□□□ -0.06
SCARB2-223ENST00000640640 TMEM177Q53S58 311 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 CENPWQ5EE01 88 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 VKORC1Q9BQB6 163 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 SSBP3Q9BWW4 388 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 PROK2Q9HC23 129 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 SRSF3P84103 164 aaKnown RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 CACNG8Q8WXS5 425 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 SLC25A15Q9Y619 301 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 TMEM189A5PLL7 270 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 IGHG3P01860 377 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 CA7P43166 264 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 PDLIM4P50479 330 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 PAFAH1B2P68402 229 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 SPANXN1Q5VSR9 72 aa14.65□□□□□ -0.06
SCARB2-223ENST00000640640 MBNL2Q5VZF2 373 aaKnown RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 MRPL18Q9H0U6 180 aaKnown RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 GSX1Q9H4S2 264 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-223ENST00000640640 TMEM116Q8NCL8 245 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 TBX15Q96SF7 602 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 HSPB9Q9BQS6 159 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 WFDC1Q9HC57 220 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 HTN1P15515 57 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 GATA2P23769 480 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-223ENST00000640640 C15orf61A6NNL5 157 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 UPK2O00526 184 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 NBEAP1P0C6P0 100 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 TMEM144Q7Z5S9 345 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 C16orf92Q96LL3 132 aa14.64□□□□□ -0.07
SCARB2-223ENST00000640640 NUP210Q8TEM1 1887 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms