RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	FAM103A1	Q9BTL3	118 aa	Known RBP	14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	TEX22	C9J3V5	150 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	WRB	O00258	174 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	ACTL6B	O94805	426 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	APELA	P0DMC3	54 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	MAS1L	P35410	378 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	RPL27A	P46776	148 aa	Known RBP	14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	FXYD3	Q14802	87 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	RBMS3	Q6XE24	437 aa	Known RBP	14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	DTD1	Q8TEA8	209 aa		14.04	□□□□□ -0.16
SPIN3-238	ENST00000640421	CEBPZOS	A8MTT3	80 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	BOLA2-SMG1P6	H3BVE0	249 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	CRLF1	O75462	422 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	CNIH1	O95406	144 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	VDAC2	P45880	294 aa	Predicted RBP	14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	SCGB2A2	Q13296	93 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	PRSS54	Q6PEW0	395 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	TMEM86B	Q8N661	226 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421	GRPEL2	Q8TAA5	225 aa		14.03	□□□□□ -0.16
SPIN3-238	ENST00000640421		H3BP45	60 aa		14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	C1QB	P02746	253 aa		14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	EGR2	P11161	476 aa	Predicted RBP	14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	LYL1	P12980	280 aa		14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	WT1-AS	Q06250	92 aa		14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	ARPC1A	Q92747	370 aa		14.02	□□□□□ -0.16
SPIN3-238	ENST00000640421	IGLC7	A0M8Q6	106 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	MSGN1	A6NI15	193 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421		M0QZK8	103 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	GPR137B	O60478	399 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	FAM157C	P0CG43	387 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	HOXA1	P49639	335 aa	Predicted RBP	14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	FGL1	Q08830	312 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	FXYD6-FXYD2	A0A087WZ82	144 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	AREG	P15514	252 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	ASPHD1	Q5U4P2	390 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	C19orf35	Q6ZS72	473 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	THAP6	Q8TBB0	222 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	PLEKHA3	Q9HB20	300 aa		14.01	□□□□□ -0.17
SPIN3-238	ENST00000640421	JMJD1C	Q15652	2540 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	ATP6V0E1	O15342	81 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	MED6	O75586	246 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	REG1A	P05451	166 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	PET100	P0DJ07	73 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	SLC25A4	P12235	298 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	NKX2-5	P52952	324 aa	Predicted RBP	14	□□□□□ -0.17
SPIN3-238	ENST00000640421	HILS1	P60008	231 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	ZFP69	Q49AA0	526 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	C9orf152	Q5JTZ5	239 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	TMEM170A	Q8WVE7	144 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	TAF15	Q92804	592 aa	Known RBP eCLIP	14	□□□□□ -0.17
SPIN3-238	ENST00000640421	RAB40C	Q96S21	281 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	ZFP57	Q9NU63	452 aa		14	□□□□□ -0.17
SPIN3-238	ENST00000640421	SETD2	Q9BYW2	2564 aa	Predicted RBP	14	□□□□□ -0.17
SPIN3-238	ENST00000640421	RLN2	P04090	185 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	ZNF418	Q8TF45	676 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	DCUN1D4	Q92564	292 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	HEYL	Q9NQ87	328 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	PARP11	Q9NR21	331 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	CACFD1	Q9UGQ2	172 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421		E5RGE8	158 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	CLDN34	H7C241	214 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	IGHG2	P01859	326 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	ABHD5	Q8WTS1	349 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	SMIM8	Q96KF7	97 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	OR4C12	Q96R67	309 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	WSB1	Q9Y6I7	421 aa		13.99	□□□□□ -0.17
SPIN3-238	ENST00000640421	OR13C7	P0DN81	318 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	TMEM95	Q3KNT9	176 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	ZNF546	Q86UE3	836 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	NOXA1	Q86UR1	476 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	LFNG	Q8NES3	379 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	PSENEN	Q9NZ42	101 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	LINC00527	Q9UJ94	153 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	TNFSF18	Q9UNG2	199 aa		13.98	□□□□□ -0.17
SPIN3-238	ENST00000640421	IGSF23	A1L1A6	192 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	RNF222	A6NCQ9	220 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	FAM181B	A6NEQ2	426 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	FAM24A	A6NFZ4	105 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	INS-IGF2	F8WCM5	200 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421		L7N2F9	121 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	ARPC5	O15511	151 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	VAMP2	P63027	116 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	SPANXN5	Q5MJ07	72 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	OR2C3	Q8N628	320 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	SGMS2	Q8NHU3	365 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	ZNF702P	Q9H963	129 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	LYRM2	Q9NU23	88 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421		A0A1W2PN81	502 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	C15orf62	A8K5M9	175 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421		G3V318	75 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	PVALB	P20472	110 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	CHRNA7	P36544	502 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	P2RY1	P47900	373 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	CAV2	P51636	162 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	TAS2R30	P59541	319 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	UBA52	P62987	128 aa	Known RBP	13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	BSX	Q3C1V8	233 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	TMEM65	Q6PI78	240 aa		13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	CIB3	Q96Q77	187 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-238	ENST00000640421	HIPK2	Q9H2X6	1198 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms