RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SRSF6Q13247 344 aaKnown RBP12.08□□□□□ -0.48
SCARB2-216ENST00000639300 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 GRAMD2BQ96HH9 432 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 RBM14Q96PK6 669 aaKnown RBP12.08□□□□□ -0.48
SCARB2-216ENST00000639300 REG4Q9BYZ8 158 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 OR51M1Q9H341 326 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-216ENST00000639300 UCNP55089 124 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 S4R3C0 116 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 BPIFA4PQ86YQ2 179 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 SFRP2Q96HF1 295 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
SCARB2-216ENST00000639300 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 NAPSAO96009 420 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 TCTAP57738 103 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 CD81P60033 236 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 ICAM4Q14773 271 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
SCARB2-216ENST00000639300 TEX50A0A1B0GTY4 177 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 VSIRQ9H7M9 311 aa12.07□□□□□ -0.48
SCARB2-216ENST00000639300 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 CORTO00230 105 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 CLEC7AQ9BXN2 247 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 CEACAM1P13688 526 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 HTN1P15515 57 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 GLRX5Q86SX6 157 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 WFDC3Q8IUB2 231 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 GGACTQ9BVM4 153 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 TICRRQ7Z2Z1 1910 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 MT-ND6P03923 174 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 SRIP30626 198 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 MORN2Q502X0 79 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 GCSAMLQ5JQS6 135 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 MRPL20Q9BYC9 149 aaKnown RBP12.06□□□□□ -0.48
SCARB2-216ENST00000639300 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 SDF2L1Q9HCN8 221 aa12.06□□□□□ -0.48
SCARB2-216ENST00000639300 YLPM1P49750 1951 aaKnown RBP12.05□□□□□ -0.48
SCARB2-216ENST00000639300 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 C1QTNF9BB2RNN3 333 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-216ENST00000639300 C17orf100A8MU93 164 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 LINC00205P59089 165 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 HOXA4Q00056 320 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-216ENST00000639300 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-216ENST00000639300 RABAC1Q9UI14 185 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-216ENST00000639300 FAM57AQ8TBR7 257 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 IFI27L2Q9H2X8 130 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 PLXNA2O75051 1894 aa12.05□□□□□ -0.48
SCARB2-216ENST00000639300 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-216ENST00000639300 RPL30P62888 115 aaKnown RBP12.04□□□□□ -0.48
SCARB2-216ENST00000639300 UNQ5815/PRO19632Q6UWF5 114 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 IMMP2LQ96T52 175 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 LYNX1G3V0Z9 82 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 LYNX1P0DP58 116 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 B9A039 149 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 LIPFP07098 398 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-216ENST00000639300 TMPRSS3P57727 454 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 C1orf147Q96MC9 270 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-216ENST00000639300 MAP1LC3CQ9BXW4 147 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 PAFAH1B2P68402 229 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 GOLT1AQ6ZVE7 132 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
SCARB2-216ENST00000639300 CD5P06127 495 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 PPOXP50336 477 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 RPL23P62829 140 aaKnown RBP12.03□□□□□ -0.48
SCARB2-216ENST00000639300 YPEL1O60688 119 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 VENTXO95231 258 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 IGKV1-5P01602 117 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 OR9G9P0C7N8 305 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
SCARB2-216ENST00000639300 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms