RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 GNRHRP30968 328 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
SMN2-216ENST00000638794 HERV-K104P61576 105 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
SMN2-216ENST00000638794 IFT46Q9NQC8 304 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 EHFQ9NZC4 300 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 COMMD9Q9P000 198 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 XRCC3O43542 346 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 RLN1P04808 185 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 TRAPPC2P0DI81 140 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 TRAPPC2BP0DI82 140 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 THOC7Q6I9Y2 204 aaKnown RBP12.57□□□□□ -0.4
SMN2-216ENST00000638794 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
SMN2-216ENST00000638794 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 SERPINE2P07093 398 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 F2RP25116 425 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 TGFBR1P36897 503 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 RFX2P48378 723 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 ERVK-16P61578 105 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 HSD17B13Q7Z5P4 300 aaPredicted RBP12.56□□□□□ -0.4
SMN2-216ENST00000638794 BORCS5Q969J3 196 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 MOB3AQ96BX8 217 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SMN2-216ENST00000638794 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 CYB5BO43169 146 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 TMEM127O75204 238 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 MFAP2P55001 183 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 DHRS11Q6UWP2 260 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 S100A16Q96FQ6 103 aaKnown RBP12.55□□□□□ -0.4
SMN2-216ENST00000638794 SPAG8Q99932 426 aaPredicted RBP12.55□□□□□ -0.4
SMN2-216ENST00000638794 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
SMN2-216ENST00000638794 HINT2Q9BX68 163 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
SMN2-216ENST00000638794 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 ANAPC10Q9UM13 185 aa12.55□□□□□ -0.4
SMN2-216ENST00000638794 PGLYRP1O75594 196 aaPredicted RBP12.54□□□□□ -0.4
SMN2-216ENST00000638794 KRASP01116 189 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 PMP2P02689 132 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 UBE2NLQ5JXB2 153 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 TMEM69Q5SWH9 247 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 SLC38A6Q8IZM9 456 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
SMN2-216ENST00000638794 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
SMN2-216ENST00000638794 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
SMN2-216ENST00000638794 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
SMN2-216ENST00000638794 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
SMN2-216ENST00000638794 TSPAN4O14817 238 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 G6PCP35575 357 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 LPAR6P43657 344 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 TAS2R20P59543 309 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 DGCR14Q96DF8 476 aaKnown RBP12.53□□□□□ -0.4
SMN2-216ENST00000638794 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 OR51B2Q9Y5P1 312 aa12.53□□□□□ -0.4
SMN2-216ENST00000638794 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 NDUFA4O00483 81 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 NAT1P18440 290 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 ADMP35318 185 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 APOC4P55056 127 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 TAS2R46P59540 309 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 ODF3L2Q3SX64 289 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 KCTD21Q4G0X4 260 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 ATP6V0BQ99437 205 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
SMN2-216ENST00000638794 DBX1A6NMT0 343 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 K7EIM0 57 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 GPR31O00270 319 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 ZNF207O43670 478 aaKnown RBP12.51□□□□□ -0.41
SMN2-216ENST00000638794 SNAPC5O75971 98 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
SMN2-216ENST00000638794 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMN2-216ENST00000638794 PMS2P11Q13670 270 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 DEFB135Q30KP9 77 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 LAMTOR1Q6IAA8 161 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 Q6ZWC4 215 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
SMN2-216ENST00000638794 CADM3Q8N126 398 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms