RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
SCARB2-208ENST00000638372 OSR1Q8TAX0 266 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-208ENST00000638372 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF497Q6ZNH5 498 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
SCARB2-208ENST00000638372 SSBP3Q9BWW4 388 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-208ENST00000638372 HSPB7Q9UBY9 170 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 TMEM30BQ3MIR4 351 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 WFIKKN1Q96NZ8 548 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-208ENST00000638372 SPANXN1Q5VSR9 72 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF525Q8N782 197 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-208ENST00000638372 TMEM250H0YL14 139 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 LILRA1O75019 489 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 LHFPL1Q86WI0 220 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 RAXQ9Y2V3 346 aa12.03□□□□□ -0.48
SCARB2-208ENST00000638372 CSPG4Q6UVK1 2322 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 PSPNO60542 156 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 IL4P05112 153 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 C18orf12Q96KH6 178 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 TBX15Q96SF7 602 aa12.02□□□□□ -0.48
SCARB2-208ENST00000638372 MGPP08493 103 aa12.02□□□□□ -0.49
SCARB2-208ENST00000638372 SRSF3P84103 164 aaKnown RBP12.02□□□□□ -0.49
SCARB2-208ENST00000638372 TMEM177Q53S58 311 aa12.02□□□□□ -0.49
SCARB2-208ENST00000638372 DPM3Q9P2X0 92 aa12.02□□□□□ -0.49
SCARB2-208ENST00000638372 CGAP01215 116 aa12.02□□□□□ -0.49
SCARB2-208ENST00000638372 LCN2P80188 198 aa12.02□□□□□ -0.49
SCARB2-208ENST00000638372 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 TM4SF5O14894 197 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-208ENST00000638372 TCTAP57738 103 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 ID3Q02535 119 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
SCARB2-208ENST00000638372 RNF224P0DH78 156 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 MORN2Q502X0 79 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 PLXND1Q9Y4D7 1925 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-208ENST00000638372 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
SCARB2-208ENST00000638372 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 GOLT1AQ6ZVE7 132 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 LINC00305Q7Z4B0 112 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 GSX1Q9H4S2 264 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-208ENST00000638372 LINC00312Q9Y6C7 94 aa12.01□□□□□ -0.49
SCARB2-208ENST00000638372 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 COX6B1P14854 86 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 DIRC3C9JPN6 131 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 NPIPB11E5RHQ5 1161 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 HGFACQ04756 655 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 PGLYRP4Q96LB8 373 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 CENPFP49454 3210 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 TMEM189A5PLL7 270 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 CXorf65A6NEN9 183 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 MPZP25189 248 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 CDKN1AP38936 164 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
SCARB2-208ENST00000638372 CENPWQ5EE01 88 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
SCARB2-208ENST00000638372 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
SCARB2-208ENST00000638372 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
SCARB2-208ENST00000638372 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12□□□□□ -0.49
SCARB2-208ENST00000638372 MT-ND6P03923 174 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 CD24P25063 80 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 DGAT2L7PQ6IED9 249 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 METTL26Q96S19 204 aa12□□□□□ -0.49
SCARB2-208ENST00000638372 ATP5G3P48201 142 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 E9PLN8 166 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 M0R143 59 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-208ENST00000638372 RBPMS2Q6ZRY4 209 aaKnown RBP11.99□□□□□ -0.49
SCARB2-208ENST00000638372 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
SCARB2-208ENST00000638372 TICRRQ7Z2Z1 1910 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 A1L4Q6 167 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 YPEL1O60688 119 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 IGHV3-23P01764 117 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 RNFT1Q5M7Z0 435 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 CYP2G1PQ6ZSU1 146 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 MDS2Q8NDY4 140 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 YPEL2Q96QA6 119 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 VPS25Q9BRG1 176 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 IGKV1D-33P01593 117 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 IGKV1-33P01594 117 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 TWIST1Q15672 202 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 FAM90A1Q86YD7 464 aa11.99□□□□□ -0.49
SCARB2-208ENST00000638372 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms