RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 SERF1AO75920 110 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 PTPN13Q12923 2485 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 KIAA1644Q3SXP7 199 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 MRPS18BQ9Y676 258 aaKnown RBP12.98□□□□□ -0.33
UBE3A-227ENST00000638011 NGFRP08138 427 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 COL10A1Q03692 680 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 ZP4Q12836 540 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 NRXN3Q9Y4C0 1643 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 TRBV5-3A0A0A0MS03 114 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 GFRA1P56159 465 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 SELENOHQ8IZQ5 122 aaKnown RBP12.97□□□□□ -0.33
UBE3A-227ENST00000638011 TMEM258P61165 79 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 IFITM3Q01628 133 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 PDCD1Q15116 288 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 HEPN1Q6WQI6 88 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 ZNF688P0C7X2 276 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 RNASEH2CQ8TDP1 164 aaKnown RBP12.97□□□□□ -0.33
UBE3A-227ENST00000638011 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 TRAV2A0A0B4J234 112 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
UBE3A-227ENST00000638011 DMRTC1Q5HYR2 192 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 CD160O95971 181 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 A0A1B0GTL3 188 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 LOXL4Q96JB6 756 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
UBE3A-227ENST00000638011 J3KRW8 73 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 C9orf153Q5TBE3 101 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 LEPP41159 167 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 SPRED2Q7Z698 418 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 IGKCP01834 107 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 FAM57AQ8TBR7 257 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 ZNF48Q96MX3 618 aaPredicted RBP12.96□□□□□ -0.33
UBE3A-227ENST00000638011 P2RY6Q15077 328 aa12.96□□□□□ -0.33
UBE3A-227ENST00000638011 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.96□□□□□ -0.33
UBE3A-227ENST00000638011 TRBV24-1A0A075B6N3 115 aa12.96□□□□□ -0.34
UBE3A-227ENST00000638011 J3QW42 95 aa12.96□□□□□ -0.34
UBE3A-227ENST00000638011 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.34
UBE3A-227ENST00000638011 OSTCQ9NRP0 149 aa12.96□□□□□ -0.34
UBE3A-227ENST00000638011 LINC00305Q7Z4B0 112 aa12.96□□□□□ -0.34
UBE3A-227ENST00000638011 NDUFA3O95167 84 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 GDF15Q99988 308 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 hCG_38984A0A1B0GV85 526 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
UBE3A-227ENST00000638011 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
UBE3A-227ENST00000638011 PGLYRP1O75594 196 aaPredicted RBP12.95□□□□□ -0.34
UBE3A-227ENST00000638011 LPAL2Q16609 132 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 SPTY2D1-AS1A0A0U1RR47 76 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 DCAF10Q5QP82 559 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 WDR82Q6UXN9 313 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 APOBEC4Q8WW27 367 aaKnown RBP12.95□□□□□ -0.34
UBE3A-227ENST00000638011 FBXW9Q5XUX1 488 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 MPV17P39210 176 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 GAGE1Q13065 139 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 EEF1AKMT3Q96AZ1 226 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 GTSF1LQ9H1H1 148 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 FAM74A4Q5TZK3 123 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
UBE3A-227ENST00000638011 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 NBEAP1P0C6P0 100 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 MALP21145 153 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 NPPCP23582 126 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 CCL20P78556 96 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 WIPI1Q5MNZ9 446 aaPredicted RBP12.94□□□□□ -0.34
UBE3A-227ENST00000638011 C21orf140B9A014 251 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 FER1L6-AS1Q8NA97 138 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 A0A1B0GW64 132 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 GFERP55789 205 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 OR11H4Q8NGC9 324 aa12.94□□□□□ -0.34
UBE3A-227ENST00000638011 SRFP11831 508 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 FOXL1Q12952 345 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
UBE3A-227ENST00000638011 TMEM186Q96B77 213 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 JPT1Q9UK76 154 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 MOSP00540 346 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
UBE3A-227ENST00000638011 ABHD17AQ96GS6 310 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 ZP1P60852 638 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 LRP5O75197 1615 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 NDUFC2O95298 119 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 UNC119Q13432 240 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 H0Y8X5 98 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 PRSS53Q2L4Q9 553 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 ALPK3Q96L96 1907 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 MLNRO43193 412 aa12.93□□□□□ -0.34
UBE3A-227ENST00000638011 HIST1H4AP62805 103 aaKnown RBP12.93□□□□□ -0.34
UBE3A-227ENST00000638011 EPDR1Q9UM22 224 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms