RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 ASCL5Q7RTU5 278 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
CLN5-218ENST00000637397 C19orf24Q9BVV8 132 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 TMEM242Q9NWH2 141 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 A0A1B0GW64 132 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 NDUFS6O75380 124 aaKnown RBP13.34□□□□□ -0.27
CLN5-218ENST00000637397 MC5RP33032 325 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 DNM1P46Q6ZS02 220 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 RAB1CQ92928 201 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 COL4A6Q14031 1691 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 E9PLN8 166 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 C17orf82Q86X59 251 aaPredicted RBP13.34□□□□□ -0.27
CLN5-218ENST00000637397 SCNM1Q9BWG6 230 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
CLN5-218ENST00000637397 HSPB7Q9UBY9 170 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 J3KRW8 73 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 MIR17HGQ75NE6 70 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 CECR9P0C854 216 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 ANAPC1Q9H1A4 1944 aa13.34□□□□□ -0.27
CLN5-218ENST00000637397 F5H697 171 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 KLF7O75840 302 aaPredicted RBP13.33□□□□□ -0.28
CLN5-218ENST00000637397 ADMP35318 185 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 PI4KAP42356 2102 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 Q1RN00 199 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 TNFSF10P50591 281 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 LHX2P50458 406 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 HOXA4Q00056 320 aaPredicted RBP13.33□□□□□ -0.28
CLN5-218ENST00000637397 SRSF12Q8WXF0 261 aaKnown RBP13.33□□□□□ -0.28
CLN5-218ENST00000637397 TMEM106BQ9NUM4 274 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 TRAV1-1A0A0B4J248 108 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 MOSP00540 346 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 PEAR1Q5VY43 1037 aaPredicted RBP13.33□□□□□ -0.28
CLN5-218ENST00000637397 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
CLN5-218ENST00000637397 OR4C13Q8NGP0 309 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 LNP1A1A4G5 178 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 CA7P43166 264 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 CLDN18P56856 261 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 OCC1Q8TAD7 63 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 RNASE7Q9H1E1 156 aaKnown RBP13.32□□□□□ -0.28
CLN5-218ENST00000637397 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 PKDREJQ9NTG1 2253 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 CEACAM1P13688 526 aa13.32□□□□□ -0.28
CLN5-218ENST00000637397 MRPL32Q9BYC8 188 aaKnown RBP13.32□□□□□ -0.28
CLN5-218ENST00000637397 BTF3P20290 206 aaKnown RBP13.31□□□□□ -0.28
CLN5-218ENST00000637397 LEMD1Q68G75 181 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 C1orf147Q96MC9 270 aaPredicted RBP13.31□□□□□ -0.28
CLN5-218ENST00000637397 LGALS7P47929 136 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 PINLYPA6NC86 204 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 GPX4P36969 197 aaPredicted RBP13.31□□□□□ -0.28
CLN5-218ENST00000637397 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 IGKV1-5P01602 117 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 CD40P25942 277 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 FOXC1Q12948 553 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 TWIST1Q15672 202 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 MIEN1Q9BRT3 115 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 RAB1BQ9H0U4 201 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 HILPDAQ9Y5L2 63 aa13.31□□□□□ -0.28
CLN5-218ENST00000637397 COMPP49747 757 aaPredicted RBP13.3□□□□□ -0.28
CLN5-218ENST00000637397 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
CLN5-218ENST00000637397 SCGB1D4Q6XE38 83 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 GGNQ86UU5 652 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 IFI27L2Q9H2X8 130 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 CACNA1HO95180 2353 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 ZNF407Q9C0G0 2248 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 CKS2P33552 79 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 PET117Q6UWS5 81 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 WDR31Q8NA23 367 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 IGHV1-2P23083 117 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 TMEM70Q9BUB7 260 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 WDR83OSQ9Y284 106 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 PLXNA4Q9HCM2 1894 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 C1orf185Q5T7R7 199 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 SPSB3Q6PJ21 355 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 ST6GALNAC6Q969X2 333 aa13.3□□□□□ -0.28
CLN5-218ENST00000637397 MRPL37Q9BZE1 423 aaKnown RBP13.3□□□□□ -0.28
CLN5-218ENST00000637397 SHANK1Q9Y566 2161 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 HBBP68871 147 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 RAB37Q96AX2 223 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 A0A0G2JRQ6 117 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 RBFOX2O43251 390 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLN5-218ENST00000637397 GPR6P46095 362 aaPredicted RBP13.29□□□□□ -0.28
CLN5-218ENST00000637397 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 DOCK11Q5JSL3 2073 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms