RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 IGKV1D-33P01593 117 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 IGKV1-33P01594 117 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
LINC00339-208ENST00000634934 CD1BP29016 333 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 MC5RP33032 325 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 MAS1LP35410 378 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 NPBWR1P48145 328 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 S100A12P80511 92 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 HNF4GQ14541 408 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 SP6Q3SY56 376 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 FAM219AQ8IW50 185 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 DDB2Q92466 427 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 PBDC1Q9BVG4 233 aa11.59□□□□□ -0.55
LINC00339-208ENST00000634934 COLCA2A8K830 154 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 H3BUX3 64 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 TSPAN15O95858 294 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 FAM106CPP0CH98 169 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 KIR2DS2P43631 304 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 HABP2Q14520 560 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-208ENST00000634934 RHEBQ15382 184 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 Q6YL49 198 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 SLC25A31Q9H0C2 315 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 TNFRSF19Q9NS68 423 aa11.58□□□□□ -0.56
LINC00339-208ENST00000634934 LSM5Q9Y4Y9 91 aaKnown RBP11.58□□□□□ -0.56
LINC00339-208ENST00000634934 H0Y980 276 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 RAMP3O60896 148 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 SERPINE2P07093 398 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 UCP1P25874 307 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 IER3P46695 156 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 DYNLT3P51808 116 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 AKR1C2P52895 323 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 BRWD1-AS2P59051 145 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 AKR1C1Q04828 323 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 LY6EQ16553 131 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 PRIMA1Q86XR5 153 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 PDPNQ86YL7 162 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 OR4S2Q8NH73 311 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 PIFOQ8TCI5 191 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
LINC00339-208ENST00000634934 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 PRDM13Q9H4Q3 707 aa11.57□□□□□ -0.56
LINC00339-208ENST00000634934 FAM90A9PA6NNJ1 464 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 HOXA3O43365 443 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-208ENST00000634934 MOSP00540 346 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 TMEM11P17152 192 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 RIPPLY3P57055 190 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
LINC00339-208ENST00000634934 FBLN7Q53RD9 439 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 THNSL2Q86YJ6 484 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 CD300LFQ8TDQ1 290 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 SSMEM1Q8WWF3 244 aa11.56□□□□□ -0.56
LINC00339-208ENST00000634934 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-208ENST00000634934 LYRM2Q9NU23 88 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-208ENST00000634934 RCL1Q9Y2P8 373 aaKnown RBP11.56□□□□□ -0.56
LINC00339-208ENST00000634934 VDAC1P21796 283 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 ID3Q02535 119 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 GUK1Q16774 197 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 NMSQ5H8A3 153 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 TMEM88Q6PEY1 159 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 OR4C13Q8NGP0 309 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 OR5R1Q8NH85 324 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 ZNF418Q8TF45 676 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-208ENST00000634934 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-208ENST00000634934 RITA1Q96K30 269 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 DUX5Q96PT3 197 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00339-208ENST00000634934 S1PR2O95136 353 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 RAB5BP61020 215 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00339-208ENST00000634934 ZNF585BQ52M93 769 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 HARBI1Q96MB7 349 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
LINC00339-208ENST00000634934 NDUFS6O75380 124 aaKnown RBP11.54□□□□□ -0.56
LINC00339-208ENST00000634934 HPRT1P00492 218 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 CRYBA1P05813 215 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 NKX2-1P43699 371 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-208ENST00000634934 CAMLGP49069 296 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 EBI3Q14213 229 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 MMDQ15546 238 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 SELENOHQ8IZQ5 122 aaKnown RBP11.54□□□□□ -0.56
LINC00339-208ENST00000634934 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 OSR1Q8TAX0 266 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-208ENST00000634934 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 COA4Q9NYJ1 87 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 PITPNC1Q9UKF7 332 aa11.54□□□□□ -0.56
LINC00339-208ENST00000634934 TRAV1-1A0A0B4J248 108 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms