RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 KIAA1456Q9P272 454 aa11.51□□□□□ -0.57
LIMS4-204ENST00000632897 FAM96BQ9Y3D0 163 aa11.51□□□□□ -0.57
LIMS4-204ENST00000632897 DOCK11Q5JSL3 2073 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 F8W036 122 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 PDLIM4P50479 330 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 ARF6P62330 175 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
LIMS4-204ENST00000632897 NDUFA4L2Q9NRX3 87 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 KPTNQ9Y664 436 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 LRBAP50851 2863 aa11.5□□□□□ -0.57
LIMS4-204ENST00000632897 APCP25054 2843 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 TET2Q6N021 2002 aaPredicted RBP11.49□□□□□ -0.57
LIMS4-204ENST00000632897 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 CA2P00918 260 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 HTR1DP28221 377 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 CEACAM3P40198 252 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 TPTE2P1Q5T6R2 138 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 SVBPQ8N300 66 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 SFT2D1Q8WV19 159 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
LIMS4-204ENST00000632897 SFTA3P0C7M3 94 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 MYOD1P15172 320 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 DLX1P56177 255 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
LIMS4-204ENST00000632897 DEFA5Q01523 94 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 MRPL41Q8IXM3 137 aaKnown RBP11.48□□□□□ -0.57
LIMS4-204ENST00000632897 RCC1LQ96I51 464 aaKnown RBP11.48□□□□□ -0.57
LIMS4-204ENST00000632897 EIF5A2Q9GZV4 153 aaKnown RBP11.48□□□□□ -0.57
LIMS4-204ENST00000632897 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
LIMS4-204ENST00000632897 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 SLC25A17O43808 307 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 SCO1O75880 301 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 IGHV4-39P01824 125 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 CRYGBP07316 175 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 M6PRP20645 277 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 MAS1LP35410 378 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
LIMS4-204ENST00000632897 CCL20P78556 96 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 FFAR4Q5NUL3 377 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 CCL19Q99731 98 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
LIMS4-204ENST00000632897 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 SIRT7Q9NRC8 400 aa11.47□□□□□ -0.57
LIMS4-204ENST00000632897 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 IGHV2-70DA0A0C4DH43 119 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 OOSP1A8MZH6 123 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 C9JQL5 133 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.57
LIMS4-204ENST00000632897 ZFP36P26651 326 aaKnown RBP11.46□□□□□ -0.57
LIMS4-204ENST00000632897 OPRK1P41145 380 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 PMS2P11Q13670 270 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 PSG5Q15238 335 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
LIMS4-204ENST00000632897 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 TREML4Q6UXN2 200 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 BPESC1Q9GZL8 116 aa11.46□□□□□ -0.57
LIMS4-204ENST00000632897 HRNRQ86YZ3 2850 aaPredicted RBP11.46□□□□□ -0.58
LIMS4-204ENST00000632897 CTXND1A0A1B0GTU2 59 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 A0A1B0GV50 99 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 FOXH1O75593 365 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 OPN1MWP04001 364 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
LIMS4-204ENST00000632897 LMO4P61968 165 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 PAX2Q02962 417 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
LIMS4-204ENST00000632897 HABP2Q14520 560 aaPredicted RBP11.45□□□□□ -0.58
LIMS4-204ENST00000632897 PRSS8Q16651 343 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 VMO1Q7Z5L0 202 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 CLDND2Q8NHS1 167 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
LIMS4-204ENST00000632897 SIRPDQ9H106 197 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 LSM4Q9Y4Z0 139 aaKnown RBP11.45□□□□□ -0.58
LIMS4-204ENST00000632897 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
LIMS4-204ENST00000632897 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 NDUFS8O00217 210 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 SNAPINO95295 136 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 PPT1P50897 306 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 RAB31Q13636 194 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 MRGPRG-AS1Q2M3A8 158 aa11.44□□□□□ -0.58
LIMS4-204ENST00000632897 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms