RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SSX7Q7RTT5 188 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 SLC35E3Q7Z769 313 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 OR11H6Q8NGC7 330 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 RXFP4Q8TDU9 374 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 RAB24Q969Q5 203 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 COMMD5Q9GZQ3 224 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 MAP1LC3BQ9GZQ8 125 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 PLEKHA3Q9HB20 300 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 KCNIP2Q9NS61 270 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 AMMECR1Q9Y4X0 333 aaPredicted RBP4.5□□□□□ -1.69
NEK3-211ENST00000629912 CACNA1AO00555 2505 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 NBASA2RRP1 2371 aa4.5□□□□□ -1.69
NEK3-211ENST00000629912 ADGRG4Q8IZF6 3080 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 LOC105371242A0A075B767 164 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 A0A087WWC5 75 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 IGHV1-3A0A0C4DH29 117 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PPR1 153 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 SMCO3A2RU48 225 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 CGB1A6NKQ9 187 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 COLCA2A8K830 154 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 B4DEV8 164 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 H3BQ15 152 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 NUPL2O15504 423 aaKnown RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 YIF1AO95070 293 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 LINC00869P0C866 280 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 RNASE2P10153 161 aaKnown RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 MYOD1P15172 320 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRTN3P24158 256 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 REG1BP48304 166 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PSMB3P49720 205 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 EFNA4P52798 201 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 SUB1P53999 127 aaKnown RBP eCLIP4.49□□□□□ -1.69
NEK3-211ENST00000629912 ELLP55199 621 aaPredicted RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRR20EP86478 221 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRR20CP86479 221 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRR20DP86480 221 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRR20BP86481 221 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PRR20AP86496 221 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 CD69Q07108 199 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 RNF212Q495C1 297 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 TMEM144Q7Z5S9 345 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 MMD2Q8IY49 270 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 PNKDQ8N490 385 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 KIR3DL3Q8N743 410 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 C15orf54Q8N8G6 183 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 OR4P4Q8NGL7 312 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 C17orf50Q8WW18 174 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 TVP23CQ96ET8 276 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 MGST2Q99735 147 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 TXNDC17Q9BRA2 123 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 C19orf24Q9BVV8 132 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 GGTLC1Q9BX51 225 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 ZNF430Q9H8G1 570 aaPredicted RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 MANBALQ9NQG1 85 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 SLC45A2Q9UMX9 530 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 INSIG2Q9Y5U4 225 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 NCOR2Q9Y618 2525 aa4.49□□□□□ -1.69
NEK3-211ENST00000629912 SPTBN1Q01082 2364 aaKnown RBP4.49□□□□□ -1.69
NEK3-211ENST00000629912 CHD8Q9HCK8 2581 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PPV4 95 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 C22orf46C9J442 243 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 E7EUB6 86 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 TMEM250H0YL14 139 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 M0R036 132 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 OVOL3O00110 214 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 ENSAO43768 121 aaKnown RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 TSPAN9O75954 239 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 SNRNP70P08621 437 aaKnown RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 FBP1P09467 338 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 STAG3L2P0CL84 134 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 STAG3L3P0CL85 134 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 FOLR2P14207 255 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 GPR6P46095 362 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 UQCRFS1P47985 274 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 CDC34P49427 236 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 COMPP49747 757 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 FGF8P55075 233 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 CD81P60033 236 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 PAX2Q02962 417 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 PNRC1Q12796 327 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 GAMTQ14353 236 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 HABP2Q14520 560 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 PSG5Q15238 335 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 PRSS8Q16651 343 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 AWAT1Q58HT5 328 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 TPTE2P1Q5T6R2 138 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 FAM122CQ6P4D5 195 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 TMEM88Q6PEY1 159 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 MOB3BQ86TA1 216 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 CBLN2Q8IUK8 224 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 MRPL41Q8IXM3 137 aaKnown RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 CYB561D1Q8N8Q1 229 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 ZNF114Q8NC26 417 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 OR10W1Q8NGF6 305 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 RITA1Q96K30 269 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms