RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
LINC00628-201ENST00000628516 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 FAM223AQ8IWN6 122 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 SGPP2Q8IWX5 399 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 Q8N1Y9 231 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 DEDD2Q8WXF8 326 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
LINC00628-201ENST00000628516 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
LINC00628-201ENST00000628516 H0Y980 276 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 OR2A4O95047 310 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 HPRT1P00492 218 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 RPA2P15927 270 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.41
LINC00628-201ENST00000628516 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 CCDC71LQ8N9Z2 235 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 OR2A7Q96R45 310 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 C5orf66Q9H5L9 145 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 GPR132Q9UNW8 380 aa12.52□□□□□ -0.41
LINC00628-201ENST00000628516 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 OR2J3O76001 311 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 KBTBD11O94819 623 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 CSN3P07498 182 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 NQO2P16083 231 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 TAS2R31P59538 309 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 SLC25A42Q86VD7 318 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
LINC00628-201ENST00000628516 COMMD9Q9P000 198 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
LINC00628-201ENST00000628516 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
LINC00628-201ENST00000628516 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 NAP1L6A6NFF2 107 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 BMPR1BO00238 502 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 CCR6P51684 374 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 SP6Q3SY56 376 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 PUSL1Q8N0Z8 303 aaKnown RBP12.5□□□□□ -0.41
LINC00628-201ENST00000628516 NECAP1Q8NC96 275 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
LINC00628-201ENST00000628516 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 SIGLEC8Q9NYZ4 499 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
LINC00628-201ENST00000628516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.49□□□□□ -0.41
LINC00628-201ENST00000628516 A8MZ25 164 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 TEX22C9J3V5 150 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 E7EUB6 86 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 SERPINE2P07093 398 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 G6PCP35575 357 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
LINC00628-201ENST00000628516 ERVK-16P61578 105 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 TMEM167AQ8TBQ9 72 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 FAM212BQ9NTI7 297 aaPredicted RBP12.49□□□□□ -0.41
LINC00628-201ENST00000628516 TMEM140Q9NV12 185 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 C19orf73Q9NVV2 129 aa12.49□□□□□ -0.41
LINC00628-201ENST00000628516 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
LINC00628-201ENST00000628516 TRAV3A0A0B4J244 114 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 CENPXA8MT69 81 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 PLA2G10O15496 165 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 KRASP01116 189 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 IGKV1-39P01597 117 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 IGKV1D-39P04432 117 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
LINC00628-201ENST00000628516 MAS1LP35410 378 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 POU2AF1Q16633 256 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 C19orf35Q6ZS72 473 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 TMED4Q7Z7H5 227 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 SLC25A21Q9BQT8 299 aaPredicted RBP12.48□□□□□ -0.41
LINC00628-201ENST00000628516 C7orf50Q9BRJ6 194 aaKnown RBP12.48□□□□□ -0.41
LINC00628-201ENST00000628516 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 BET1LQ9NYM9 111 aa12.48□□□□□ -0.41
LINC00628-201ENST00000628516 IZUMO1RA6ND01 250 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 PPP5D1E7EU14 171 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 OR5AC1P0C628 307 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 AKR1C4P17516 323 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 BTCP35070 178 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
LINC00628-201ENST00000628516 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
LINC00628-201ENST00000628516 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 OR4A5Q8NH83 315 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
LINC00628-201ENST00000628516 A0A1B0GW64 132 aa12.46□□□□□ -0.41
LINC00628-201ENST00000628516 UPK2O00526 184 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms