RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MYOD1P15172 320 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 LGALS7P47929 136 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 SULT1A1P50225 295 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 ARL16Q0P5N6 197 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 ZNF266Q14584 549 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 VMA21Q3ZAQ7 101 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 SPINK9Q5DT21 86 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 MINOS1Q5TGZ0 78 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 DYNAPQ8N1N2 210 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM217Q8N7C4 229 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 OR5C1Q8NGR4 320 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 PCNPQ8WW12 178 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 FKBP11Q9NYL4 201 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 MINOS1-NBL1R4GNA1 71 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM89A2RUT3 159 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TRIM77I1YAP6 450 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 KBTBD11O94819 623 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 FGF2P09038 288 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 METTL15P1P0C7V9 234 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 UBE2E1P51965 193 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 HSPE1P61604 102 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM267Q0VDI3 215 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 CLINT1Q14677 625 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 EIF5AL1Q6IS14 154 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 CCDC144NLQ6NUI1 221 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 SLC7A5P1Q8MH63 180 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 UBAC2Q8NBM4 344 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 OR1S2Q8NGQ3 325 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 OR4A5Q8NH83 315 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 CFHR4Q92496 578 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 HIPK2Q9H2X6 1198 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 ZNF257Q9Y2Q1 563 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 HILPDAQ9Y5L2 63 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 OR51B2Q9Y5P1 312 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 TRAV20A0A0B4J274 112 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 PMS2P5A8MQ11 134 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 OOSP1A8MZH6 123 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TIMM23O14925 209 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 DYNLT3P51808 116 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 HBG1P69891 147 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 HBG2P69892 147 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 RPP30P78346 268 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 PAX8Q06710 450 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 HABP2Q14520 560 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 FAM74A1Q5RGS3 127 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM14EPQ6UXP3 125 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 C3orf56Q8N813 242 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 OR5B3Q8NH48 314 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM167AQ8TBQ9 72 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 OR4C12Q96R67 309 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TSNAXQ99598 290 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 ARV1Q9H2C2 271 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 ENY2Q9NPA8 101 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 TBL2Q9Y4P3 447 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-223ENST00000627587 SLC25A17O43808 307 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 DFFBO76075 338 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 VENTXO95231 258 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 MSMBP08118 114 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 CNTFRP26992 372 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 CD1BP29016 333 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 VDAC2P45880 294 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 RPL8P62917 257 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 SSX2Q16385 188 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 CLLU1Q5K131 121 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 THNSL2Q86YJ6 484 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 STPG2Q8N412 459 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM170AQ8WVE7 144 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 RNF5Q99942 180 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 COMMD5Q9GZQ3 224 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 HIF1ANQ9NWT6 349 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 A0A1B0GW64 132 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 CGB1A6NKQ9 187 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 E7EUB6 86 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 CRYGBP07316 175 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 NMBP08949 121 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 PRCDQ00LT1 54 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 OR8G2PQ6IF36 304 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 LILRB2Q8N423 598 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 TEX45Q8NA69 505 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 TMED6Q8WW62 240 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 MALSU1Q96EH3 234 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 ATP5SQ99766 215 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 HINT2Q9BX68 163 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 SLC25A32Q9H2D1 315 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 PLEKHA3Q9HB20 300 aa7.6□□□□□ -1.19
PDLIM5-223ENST00000627587 TEX50A0A1B0GTY4 177 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 C15orf62A8K5M9 175 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 WIPF1O43516 503 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 FBXO24O75426 580 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 IFNA10P01566 189 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 F2RL1P55085 397 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 HILS1P60008 231 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms