RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 GPR12P47775 334 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 CAMPP49913 170 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 RPP25LQ8N5L8 163 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 C11orf44Q8N8P7 122 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 OR10G9Q8NGN4 311 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 OR10G7Q8NGN6 311 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 FRZBQ92765 325 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 STARD4Q96DR4 205 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 YPEL2Q96QA6 119 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 TMEM147Q9BVK8 224 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 RAI1Q7Z5J4 1906 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 IGHV3OR15-7A0A075B7D8 119 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 CGB1A6NKQ9 187 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 TMEM250H0YL14 139 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 ZG16O60844 167 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 IL6RP08887 468 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 GNLYP22749 145 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 LOXL3P58215 753 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 CD81P60033 236 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 ERVK-16P61578 105 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 VWA1Q6PCB0 445 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 LRRC29Q8WV35 223 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 CIB3Q96Q77 187 aaPredicted RBP5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 JPT1Q9UK76 154 aa5.94□□□□□ -1.46
CTNNA1-244ENST00000627109 POLQO75417 2590 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 IGLV3-9A0A075B6K5 115 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 LINC00473A8K010 186 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 C17orf98A8MV24 154 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 M0R1X1 148 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 CRYAAP02489 173 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 AREGP15514 252 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ZNF83P51522 516 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 SMIM21Q3B7S5 101 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ZNF718Q3SXZ3 478 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ACSM6Q6P461 480 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 GGACTQ9BVM4 153 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ZNF705GA8MUZ8 300 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 SPRY3O43610 288 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 RPLP1P05386 114 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 CDKN1BP46527 198 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 COL10A1Q03692 680 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 USF2Q15853 346 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 MSMPQ1L6U9 139 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 CYP2G1PQ6ZSU1 146 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 VKORC1L1Q8N0U8 176 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 Q8NA96 180 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 OR13A1Q8NGR1 328 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 TMEM204Q9BSN7 226 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ONECUT1Q9UBC0 465 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 METRNQ9UJH8 293 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 FBXL7Q9UJT9 491 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 MED13LQ71F56 2210 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 USP9YO00507 2555 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 IGKV1D-17A0A075B6S4 117 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 M0R1B8 84 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 EGR1P18146 543 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 DUTP33316 252 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 UQCRFS1P47985 274 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 RNASEKQ6P5S7 137 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 TMEM37Q8WXS4 190 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 ENY2Q9NPA8 101 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 GSN-AS1Q9NRJ2 163 aa5.93□□□□□ -1.46
CTNNA1-244ENST00000627109 RELNP78509 3460 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 C15orf62A8K5M9 175 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 PPP5D1E7EU14 171 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 PAGE4O60829 102 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 VDAC2P45880 294 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 CDX1P47902 265 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 ATP5J2P56134 94 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 FOXF2Q12947 444 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 TMEM241Q24JQ0 296 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 Q8TCH9 128 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 LEAP2Q969E1 77 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 PATZ1Q9HBE1 687 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 MANBALQ9NQG1 85 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 A1L4Q6 167 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 POU2AF1Q16633 256 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 MORN2Q502X0 79 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 GFI1BQ5VTD9 330 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 NPCDR1Q9BY65 106 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 PLCE1Q9P212 2302 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 TET2Q6N021 2002 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 FAM90A27PA6NNH2 459 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 H0Y8G0 127 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 KBTBD11O94819 623 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 CEACAM3P40198 252 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 BSXQ3C1V8 233 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 SPNS3Q6ZMD2 512 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 GATAD1Q8WUU5 269 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 ALKBH7Q9BT30 221 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 NAV2Q8IVL1 2488 aa5.92□□□□□ -1.46
CTNNA1-244ENST00000627109 FNDC10F2Z333 226 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms