RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CPAMD8Q8IZJ3 1885 aa1.39□□□□□ -2.19
CDR1-202ENST00000625883 TRGV2A0A075B6R0 118 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 IGHV3-7P01780 117 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 C1QAP02745 245 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 PRM2P04554 102 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 SULT1A3P0DMM9 295 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 SULT1A4P0DMN0 295 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 SULT1A1P50225 295 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 GRK1Q15835 563 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 DCXRQ7Z4W1 244 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 PPP1R2P1Q96PQ5 205 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 WDR61Q9GZS3 305 aaKnown RBP1.38□□□□□ -2.19
CDR1-202ENST00000625883 UBAP1Q9NZ09 502 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 PKIGQ9Y2B9 76 aa1.38□□□□□ -2.19
CDR1-202ENST00000625883 FN1P02751 2386 aaKnown RBP1.38□□□□□ -2.19
CDR1-202ENST00000625883 CUL9Q8IWT3 2517 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 PLB1Q6P1J6 1458 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MEIS3P1A6NDR6 274 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 SMIM23A6NLE4 172 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 CHP2O43745 196 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 NOS1APO75052 506 aaPredicted RBP1.37□□□□□ -2.19
CDR1-202ENST00000625883 LYPLA2O95372 231 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 SERPINA6P08185 405 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 CCL20P78556 96 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 NUMA1Q14980 2115 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 ACOT6Q3I5F7 207 aaPredicted RBP1.37□□□□□ -2.19
CDR1-202ENST00000625883 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 PTPRBP23467 1997 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MUC6Q6W4X9 2439 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MYO3BQ8WXR4 1341 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 CR1P17927 2039 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 COL4A1P02462 1669 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 IGKV1D-43A0A0B4J1Z2 117 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 TRGC1P0CF51 173 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 GPX2P18283 190 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 HIST1H1TP22492 207 aaPredicted RBP1.37□□□□□ -2.19
CDR1-202ENST00000625883 KISS1Q15726 138 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MOGQ16653 247 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 Q6ZS49 121 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 C10orf126Q8N4M7 172 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MNS1Q8NEH6 495 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 Q96M85 177 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 OR52E6Q96RD3 313 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 MRPL32Q9BYC8 188 aaKnown RBP1.37□□□□□ -2.19
CDR1-202ENST00000625883 VPS29Q9UBQ0 182 aa1.37□□□□□ -2.19
CDR1-202ENST00000625883 KIF24Q5T7B8 1368 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 WRNQ14191 1432 aaPredicted RBP eCLIP1.36□□□□□ -2.19
CDR1-202ENST00000625883 ZFHX2Q9C0A1 2572 aaPredicted RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 TRBV10-2A0A0K0K1G8 114 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 CLDN24A6NM45 220 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 FABP5P3A8MUU1 101 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 IBA57-AS1B1ANH7 110 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 PSMD12O00232 456 aaPredicted RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 SLC22A1O15245 554 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 ORC5O43913 435 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 RPS17P08708 135 aaKnown RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 CD79AP11912 226 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 SUPT4H1P63272 117 aaKnown RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 IBA57Q5T440 356 aaKnown RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 TMEM86AQ8N2M4 240 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 CLDN22Q8N7P3 220 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 MRPL30Q8TCC3 161 aaKnown RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 CCDC42Q96M95 316 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 DERL1Q9BUN8 251 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 MRPL27Q9P0M9 148 aaKnown RBP1.36□□□□□ -2.19
CDR1-202ENST00000625883 TP73-AS1Q9UF72 201 aa1.36□□□□□ -2.19
CDR1-202ENST00000625883 RALGAPA2Q2PPJ7 1873 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 GREB1Q4ZG55 1949 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 IRGMA1A4Y4 181 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 KPNA3O00505 521 aaPredicted RBP1.35□□□□□ -2.19
CDR1-202ENST00000625883 FAAHO00519 579 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 IGKV1-5P01602 117 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 HLA-DRB1P01911 266 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 MAGEA12P43365 314 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 RPL5P46777 297 aaKnown RBP1.35□□□□□ -2.19
CDR1-202ENST00000625883 PSME3P61289 254 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 SNRPD2P62316 118 aaKnown RBP1.35□□□□□ -2.19
CDR1-202ENST00000625883 Q1T7F1 81 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 RGS21Q2M5E4 152 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 ARHGAP11BQ3KRB8 267 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 AADACL3Q5VUY0 350 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 FAM173BQ6P4H8 233 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 TRAPPC5Q8IUR0 188 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 C20orf196Q8IYI0 205 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 MTUS2Q5JR59 1369 aa1.35□□□□□ -2.19
CDR1-202ENST00000625883 MAST2Q6P0Q8 1798 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 RPS4Y1P22090 263 aaKnown RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 AKR1C3P42330 323 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 ZNF80P51504 273 aaPredicted RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 FXYD2P54710 66 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 RPS20P60866 119 aaKnown RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 LSM6P62312 80 aaKnown RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 HBA1P69905 142 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 KCNJ8Q15842 424 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 FP248Q71RG6 208 aaPredicted RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 LRRC25Q8N386 305 aaPredicted RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 NAA38Q9BRA0 125 aaKnown RBP1.34□□□□□ -2.19
CDR1-202ENST00000625883 CST9LQ9H4G1 147 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 FBXL12Q9NXK8 326 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms